RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CA1P00915 261 aaPredicted RBP9.46□□□□□ -0.9
SMPD1-202ENST00000526280 IGKV3-20P01619 116 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 FGF8P55075 233 aaPredicted RBP9.46□□□□□ -0.9
SMPD1-202ENST00000526280 NUTF2P61970 127 aaKnown RBP9.46□□□□□ -0.9
SMPD1-202ENST00000526280 PMS2P11Q13670 270 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 DEFB135Q30KP9 77 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 OR4B1Q8NGF8 309 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 OR8A1Q8NGG7 326 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 RNF183Q96D59 192 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 MRPL53Q96EL3 112 aaKnown RBP9.46□□□□□ -0.9
SMPD1-202ENST00000526280 MAP1LC3BQ9GZQ8 125 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 SMCO4Q9NRQ5 59 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 PRELID1Q9Y255 219 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 TP53TG1Q9Y2A0 90 aa9.46□□□□□ -0.9
SMPD1-202ENST00000526280 CTXND1A0A1B0GTU2 59 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 M0R036 132 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 SPRY2O43597 315 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 IFNA1P01562 189 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 ZNF705DP0CH99 300 aaPredicted RBP9.45□□□□□ -0.9
SMPD1-202ENST00000526280 ZNF705BP0CI00 300 aaPredicted RBP9.45□□□□□ -0.9
SMPD1-202ENST00000526280 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 BCL2P10415 239 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 CNN1P51911 297 aaKnown RBP9.45□□□□□ -0.9
SMPD1-202ENST00000526280 LYPD1Q8N2G4 141 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 AAMDCQ9H7C9 122 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 RPS10P5Q9NQ39 176 aa9.45□□□□□ -0.9
SMPD1-202ENST00000526280 STAB2Q8WWQ8 2551 aa9.44□□□□□ -0.9
SMPD1-202ENST00000526280 M0R3E3 92 aa9.44□□□□□ -0.9
SMPD1-202ENST00000526280 CXorf1O96002 111 aa9.44□□□□□ -0.9
SMPD1-202ENST00000526280 PRB4P10163 310 aaPredicted RBP9.44□□□□□ -0.9
SMPD1-202ENST00000526280 RANP62826 216 aaKnown RBP9.44□□□□□ -0.9
SMPD1-202ENST00000526280 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
SMPD1-202ENST00000526280 RHEBQ15382 184 aa9.44□□□□□ -0.9
SMPD1-202ENST00000526280 AMTNQ6UX39 209 aa9.44□□□□□ -0.9
SMPD1-202ENST00000526280 GCHFRP30047 84 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 AKR1C3P42330 323 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 CYB561D1Q8N8Q1 229 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 CSNK1G2-AS1Q8NCQ2 148 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 Q9H3A6 140 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 XCL2Q9UBD3 114 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 VAX2Q9UIW0 290 aa9.43□□□□□ -0.9
SMPD1-202ENST00000526280 TAGLN2P37802 199 aaKnown RBP9.42□□□□□ -0.9
SMPD1-202ENST00000526280 CEBPGP53567 150 aa9.42□□□□□ -0.9
SMPD1-202ENST00000526280 FXYD7P58549 80 aa9.42□□□□□ -0.9
SMPD1-202ENST00000526280 C15orf54Q8N8G6 183 aa9.42□□□□□ -0.9
SMPD1-202ENST00000526280 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
SMPD1-202ENST00000526280 TVP23CQ96ET8 276 aa9.42□□□□□ -0.9
SMPD1-202ENST00000526280 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
SMPD1-202ENST00000526280 COLCA2A8K830 154 aa9.41□□□□□ -0.9
SMPD1-202ENST00000526280 OTORQ9NRC9 128 aa9.41□□□□□ -0.9
SMPD1-202ENST00000526280 PGPA6NDG6 321 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 NPIPB6E9PJ23 425 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 NDUFS6O75380 124 aaKnown RBP9.4□□□□□ -0.9
SMPD1-202ENST00000526280 AMBPP02760 352 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 CSN1S1P47710 185 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 OR11H2Q8NH07 326 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 LINC00477Q96M19 166 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 TMPRSS5Q9H3S3 457 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
SMPD1-202ENST00000526280 M0R2Z0 102 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 CT45A10P0DMU9 189 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 FLI1Q01543 452 aaPredicted RBP9.39□□□□□ -0.91
SMPD1-202ENST00000526280 ERCC8Q13216 396 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 SPINK13Q1W4C9 94 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 C9orf47Q6ZRZ4 202 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 ARL6IP6Q8N6S5 226 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 ODF3Q96PU9 254 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 EDA2RQ9HAV5 297 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 PPP1R14DQ9NXH3 145 aa9.39□□□□□ -0.91
SMPD1-202ENST00000526280 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
SMPD1-202ENST00000526280 A0A087WWC5 75 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 DIRC3C9JPN6 131 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 CRXO43186 299 aaPredicted RBP9.38□□□□□ -0.91
SMPD1-202ENST00000526280 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
SMPD1-202ENST00000526280 ZNF705AQ6ZN79 300 aaPredicted RBP9.38□□□□□ -0.91
SMPD1-202ENST00000526280 IQCF2Q8IXL9 164 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 CMTM2Q8TAZ6 248 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 HIST1H2BAQ96A08 127 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 IGF2BP2-AS1Q96M15 143 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 WWC2-AS2Q96NR7 200 aa9.38□□□□□ -0.91
SMPD1-202ENST00000526280 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 B4DEV8 164 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 MT-ND4LP03901 98 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 SLC25A5P05141 298 aaKnown RBP9.37□□□□□ -0.91
SMPD1-202ENST00000526280 TSPOP30536 169 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 CDKN1BP46527 198 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 MEF2BQ02080 365 aaPredicted RBP9.37□□□□□ -0.91
SMPD1-202ENST00000526280 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 VGLL1Q99990 258 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 X6R8D5 127 aa9.37□□□□□ -0.91
SMPD1-202ENST00000526280 DNAH7Q8WXX0 4024 aa9.36□□□□□ -0.91
SMPD1-202ENST00000526280 TRAV12-2A0A075B6T6 113 aa9.36□□□□□ -0.91
SMPD1-202ENST00000526280 ZNF727A8MUV8 499 aa9.36□□□□□ -0.91
SMPD1-202ENST00000526280 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms