RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 LENEPQ9Y5L5 61 aa12.43□□□□□ -0.42
LMX1B-203ENST00000526117 KLLNB2CW77 178 aa12.42□□□□□ -0.42
LMX1B-203ENST00000526117 DIRC3C9JPN6 131 aa12.42□□□□□ -0.42
LMX1B-203ENST00000526117 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
LMX1B-203ENST00000526117 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
LMX1B-203ENST00000526117 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
LMX1B-203ENST00000526117 hCG_2014768A0A024R1R8 64 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 TRAV12-2A0A075B6T6 113 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 IGKV2-40A0A087WW87 121 aaPredicted RBP12.41□□□□□ -0.42
LMX1B-203ENST00000526117 TEX48A0A1B0GUV7 120 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 SERTM2A0A1B0GWG4 89 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 A0A1W2PRE2 83 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 PGPA6NDG6 321 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 H7BYZ3 331 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 IGKV2D-40P01614 121 aaPredicted RBP12.41□□□□□ -0.42
LMX1B-203ENST00000526117 ZNF138P52744 262 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 GFI1BQ5VTD9 330 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 TMEM208Q9BTX3 173 aa12.41□□□□□ -0.42
LMX1B-203ENST00000526117 IGHV3OR16-12A0A075B7B8 117 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 NUPR2A6NF83 97 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 DEFB4AO15263 64 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 PRB4P10163 310 aaPredicted RBP12.4□□□□□ -0.42
LMX1B-203ENST00000526117 TAS2R60P59551 318 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 ERCC8Q13216 396 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 C5orf17Q8NAS9 161 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 CMTM2Q8TAZ6 248 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 VGLL1Q99990 258 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 ARL2-SNX15V9GYD0 113 aa12.4□□□□□ -0.42
LMX1B-203ENST00000526117 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
LMX1B-203ENST00000526117 MAP1LC3B2A6NCE7 125 aa12.39□□□□□ -0.43
LMX1B-203ENST00000526117 EIF5AL1Q6IS14 154 aaKnown RBP12.39□□□□□ -0.43
LMX1B-203ENST00000526117 ZFAND2AQ8N6M9 145 aa12.39□□□□□ -0.43
LMX1B-203ENST00000526117 LINC00467Q9BRT7 94 aa12.39□□□□□ -0.43
LMX1B-203ENST00000526117 NKX6-2Q9C056 277 aaPredicted RBP12.39□□□□□ -0.43
LMX1B-203ENST00000526117 MAP1LC3BQ9GZQ8 125 aa12.39□□□□□ -0.43
LMX1B-203ENST00000526117 PLA2G2EQ9NZK7 142 aa12.39□□□□□ -0.43
LMX1B-203ENST00000526117 RYR3Q15413 4870 aa12.39□□□□□ -0.43
LMX1B-203ENST00000526117 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
LMX1B-203ENST00000526117 ZFAND6Q6FIF0 208 aa12.38□□□□□ -0.43
LMX1B-203ENST00000526117 ZNF493Q6ZR52 646 aa12.38□□□□□ -0.43
LMX1B-203ENST00000526117 SLC51BQ86UW2 128 aa12.38□□□□□ -0.43
LMX1B-203ENST00000526117 MBD3L1Q8WWY6 194 aa12.38□□□□□ -0.43
LMX1B-203ENST00000526117 STARD9Q9P2P6 4700 aa12.38□□□□□ -0.43
LMX1B-203ENST00000526117 A0A1B0GVG6 124 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 C7orf71A4D174 169 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 CXorf65A6NEN9 183 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 FBLL1A6NHQ2 334 aaKnown RBP12.37□□□□□ -0.43
LMX1B-203ENST00000526117 GGTLC3B5MD39 225 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 C11orf94C9JXX5 98 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 ZNF324O75467 553 aaPredicted RBP12.37□□□□□ -0.43
LMX1B-203ENST00000526117 SPART-AS1P0CW21 52 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 RAB5CP51148 216 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 C9orf62Q8N4C0 152 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 LINC01587Q99440 93 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 PYGO2Q9BRQ0 406 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 NIPSNAP3BQ9BS92 247 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 TENM2Q9NT68 2774 aa12.37□□□□□ -0.43
LMX1B-203ENST00000526117 FHITP49789 147 aa12.36□□□□□ -0.43
LMX1B-203ENST00000526117 NANOS2P60321 138 aaKnown RBP12.36□□□□□ -0.43
LMX1B-203ENST00000526117 ZFP69Q49AA0 526 aa12.36□□□□□ -0.43
LMX1B-203ENST00000526117 CEMP1Q6PRD7 247 aaPredicted RBP12.36□□□□□ -0.43
LMX1B-203ENST00000526117 TMEM263Q8WUH6 116 aaKnown RBP12.36□□□□□ -0.43
LMX1B-203ENST00000526117 C16orf74Q96GX8 76 aa12.36□□□□□ -0.43
LMX1B-203ENST00000526117 TCEAL7Q9BRU2 100 aa12.36□□□□□ -0.43
LMX1B-203ENST00000526117 DKK2Q9UBU2 259 aa12.36□□□□□ -0.43
LMX1B-203ENST00000526117 CELA1Q9UNI1 258 aa12.36□□□□□ -0.43
LMX1B-203ENST00000526117 PLAC8L1A1L4L8 177 aa12.35□□□□□ -0.43
LMX1B-203ENST00000526117 LYRM9A8MSI8 78 aa12.35□□□□□ -0.43
LMX1B-203ENST00000526117 ZNF705GA8MUZ8 300 aaPredicted RBP12.35□□□□□ -0.43
LMX1B-203ENST00000526117 TCRAP04437 139 aa12.35□□□□□ -0.43
LMX1B-203ENST00000526117 GPX1P07203 203 aa12.35□□□□□ -0.43
LMX1B-203ENST00000526117 CD300CQ08708 224 aa12.35□□□□□ -0.43
LMX1B-203ENST00000526117 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
LMX1B-203ENST00000526117 PHLDA1Q8WV24 401 aaPredicted RBP12.35□□□□□ -0.43
LMX1B-203ENST00000526117 EPDR1Q9UM22 224 aa12.35□□□□□ -0.43
LMX1B-203ENST00000526117 YTHDF2Q9Y5A9 579 aaKnown RBP12.35□□□□□ -0.43
LMX1B-203ENST00000526117 TRAV12-3A0A0B4J271 114 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 FAM74A7A6NL05 159 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 K7EQM0 130 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
LMX1B-203ENST00000526117 SUMO1P63165 101 aaKnown RBP12.34□□□□□ -0.43
LMX1B-203ENST00000526117 C12orf74Q32Q52 190 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 Q6AWC8 147 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 GOLT1AQ6ZVE7 132 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 IQCF2Q8IXL9 164 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 Q8TAT8 98 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 FAM213BQ8TBF2 198 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 ATG101Q9BSB4 218 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 TMPRSS5Q9H3S3 457 aa12.34□□□□□ -0.43
LMX1B-203ENST00000526117 TRAV1-1A0A0B4J248 108 aa12.33□□□□□ -0.44
LMX1B-203ENST00000526117 SULT1A2P50226 295 aa12.33□□□□□ -0.44
LMX1B-203ENST00000526117 BTN1A1Q13410 526 aa12.33□□□□□ -0.44
LMX1B-203ENST00000526117 PMS2P11Q13670 270 aa12.33□□□□□ -0.44
LMX1B-203ENST00000526117 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.44
LMX1B-203ENST00000526117 CYB561D1Q8N8Q1 229 aa12.33□□□□□ -0.44
LMX1B-203ENST00000526117 KLK5Q9Y337 293 aaPredicted RBP12.33□□□□□ -0.44
LMX1B-203ENST00000526117 DYNC2H1Q8NCM8 4307 aaKnown RBP12.33□□□□□ -0.44
LMX1B-203ENST00000526117 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
LMX1B-203ENST00000526117 AZU1P20160 251 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms