RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 PSMB3P49720 205 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 OR5I1Q13606 314 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 PDE6HQ13956 83 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 GUK1Q16774 197 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 AKR1C8PQ5T2L2 129 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 PATE2Q6UY27 113 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 PQLC2Q6ZP29 291 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 TMEM182Q6ZP80 229 aaPredicted RBP4.61□□□□□ -1.67
CD44-221ENST00000526000 LINC00305Q7Z4B0 112 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 RNF182Q8N6D2 247 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 ZNRF2Q8NHG8 242 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 TMEM37Q8WXS4 190 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 IGF2BP2-AS1Q96M15 143 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 LINC01587Q99440 93 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 SLC25A32Q9H2D1 315 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 TMEM14CQ9P0S9 112 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 DOK5Q9P104 306 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 FUT9Q9Y231 359 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 ABCA13Q86UQ4 5058 aa4.61□□□□□ -1.67
CD44-221ENST00000526000 A0A0J9YY99 117 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 CTXND1A0A1B0GTU2 59 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 TEX48A0A1B0GUV7 120 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 ZNF253O75346 499 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 CDK2AP2O75956 126 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 CNN1P51911 297 aaKnown RBP4.6□□□□□ -1.67
CD44-221ENST00000526000 CCL18P55774 89 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 KRTAP10-2P60368 255 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 CD300CQ08708 224 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 KHDC3LQ587J8 217 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 LCN15Q6UWW0 184 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 AMTNQ6UX39 209 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 SSX7Q7RTT5 188 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 Q8N1X5 172 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 C15orf53Q8NAA6 179 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 OR10G4Q8NGN3 311 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 OR10G9Q8NGN4 311 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 OR10G7Q8NGN6 311 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 LRRC20Q8TCA0 184 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 RNF141Q8WVD5 230 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 C17orf77Q96MU5 243 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 ACTR3CQ9C0K3 210 aaPredicted RBP4.6□□□□□ -1.67
CD44-221ENST00000526000 RPRMQ9NS64 109 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 PPP1R14DQ9NXH3 145 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 NACAE9PAV3 2078 aa4.6□□□□□ -1.67
CD44-221ENST00000526000 TRAV8-2A0A0B4J237 113 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 TEX46H3BTG2 121 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 ISLRO14498 428 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 CRXO43186 299 aaPredicted RBP4.59□□□□□ -1.67
CD44-221ENST00000526000 ATP5G1P05496 136 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 HIST1H1EP10412 219 aaKnown RBP4.59□□□□□ -1.67
CD44-221ENST00000526000 ATP5G3P48201 142 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 CDC34P49427 236 aaPredicted RBP4.59□□□□□ -1.67
CD44-221ENST00000526000 PPT1P50897 306 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 HIST1H1AQ02539 215 aaPredicted RBP4.59□□□□□ -1.67
CD44-221ENST00000526000 SPATA31B1PQ5VZV4 182 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 LYPD1Q8N2G4 141 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 ARL6IP6Q8N6S5 226 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 ZNF738Q8NE65 137 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 SLC50A1Q9BRV3 221 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 Q9H8V8 135 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 NOP10Q9NPE3 64 aaKnown RBP4.59□□□□□ -1.67
CD44-221ENST00000526000 TMEM167BQ9NRX6 74 aa4.59□□□□□ -1.67
CD44-221ENST00000526000 PKD1P98161 4303 aa4.59□□□□□ -1.68
CD44-221ENST00000526000 PKHD1P08F94 4074 aa4.59□□□□□ -1.68
CD44-221ENST00000526000 CBY3A6NI87 242 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 LYRM9A8MSI8 78 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 J3KRW8 73 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 MRPS12O15235 138 aaKnown RBP4.58□□□□□ -1.68
CD44-221ENST00000526000 DUSP14O95147 198 aaKnown RBP4.58□□□□□ -1.68
CD44-221ENST00000526000 CXorf1O96002 111 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 INSP01308 110 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 STAG3L2P0CL84 134 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 STAG3L3P0CL85 134 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 SULT1A2P50226 295 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 RAB2AP61019 212 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 KIR3DS1Q14943 382 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 MBD3L1Q8WWY6 194 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 MRPL53Q96EL3 112 aaKnown RBP4.58□□□□□ -1.68
CD44-221ENST00000526000 FAM167A-AS1Q96KT0 104 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 CLUHP3Q96NS8 147 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 PAXXQ9BUH6 204 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 KRTAP1-5Q9BYS1 174 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 NKX6-2Q9C056 277 aaPredicted RBP4.58□□□□□ -1.68
CD44-221ENST00000526000 SH3BGRL3Q9H299 93 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 OR51M1Q9H341 326 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 ZNF586Q9NXT0 402 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 PRELID1Q9Y255 219 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 TNFRSF18Q9Y5U5 241 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 ARL2-SNX15V9GYD0 113 aa4.58□□□□□ -1.68
CD44-221ENST00000526000 HSPG2P98160 4391 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 TRAV26-1A0A087WT03 109 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 TRAV1-1A0A0B4J248 108 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 GAGE12BA1L429 117 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 PLAC8L1A1L4L8 177 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 H3BTX0 84 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 OR7C2O60412 319 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 GAGE7O76087 117 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 IFNA7P01567 189 aa4.57□□□□□ -1.68
CD44-221ENST00000526000 NBEAP1P0C6P0 100 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms