RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 FAM19A4Q96LR4 140 aa8.4□□□□□ -1.06
SSBP3-210ENST00000525990 ODF3Q96PU9 254 aa8.4□□□□□ -1.06
SSBP3-210ENST00000525990 VGLL1Q99990 258 aa8.4□□□□□ -1.06
SSBP3-210ENST00000525990 WDR61Q9GZS3 305 aaKnown RBP8.4□□□□□ -1.06
SSBP3-210ENST00000525990 TMPRSS5Q9H3S3 457 aa8.4□□□□□ -1.06
SSBP3-210ENST00000525990 PTTG2Q9NZH5 202 aa8.4□□□□□ -1.06
SSBP3-210ENST00000525990 TIMM9Q9Y5J7 89 aa8.4□□□□□ -1.06
SSBP3-210ENST00000525990 PKHD1P08F94 4074 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 TRAV26-1A0A087WT03 109 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 C7orf71A4D174 169 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 KLLNB2CW77 178 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 MPDU1O75352 247 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 ZNF575Q86XF7 245 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 C11orf72Q8NBR9 251 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 Q8TAT8 98 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 PPP1R1CQ8WVI7 109 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 SLC25A31Q9H0C2 315 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 GSN-AS1Q9NRJ2 163 aa8.39□□□□□ -1.07
SSBP3-210ENST00000525990 SNURFLB1AK76 121 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 ZNF324O75467 553 aaPredicted RBP8.38□□□□□ -1.07
SSBP3-210ENST00000525990 RLN2P04090 185 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 SLC25A5P05141 298 aaKnown RBP8.38□□□□□ -1.07
SSBP3-210ENST00000525990 NBEAP1P0C6P0 100 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
SSBP3-210ENST00000525990 TNP2Q05952 138 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 PDE6HQ13956 83 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 SSX7Q7RTT5 188 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 CCDC28AQ8IWP9 274 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 ZFAND2AQ8N6M9 145 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 FXYD5Q96DB9 178 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 PYGO2Q9BRQ0 406 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 MARVELD1Q9BSK0 173 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 SMIM3Q9BZL3 60 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 OR51M1Q9H341 326 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 TP53TG3Q9ULZ0 132 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 KLF12Q9Y4X4 402 aa8.38□□□□□ -1.07
SSBP3-210ENST00000525990 MUC4Q99102 2169 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 NBDYA0A0U1RRE5 68 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 PRAF2O60831 178 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 MPC2O95563 127 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 C9orf47Q6ZRZ4 202 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 GNPNAT1Q96EK6 184 aaPredicted RBP8.37□□□□□ -1.07
SSBP3-210ENST00000525990 PAXXQ9BUH6 204 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 AAMDCQ9H7C9 122 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 FUT9Q9Y231 359 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 PRELID1Q9Y255 219 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 HSPB11Q9Y547 144 aa8.37□□□□□ -1.07
SSBP3-210ENST00000525990 SSNA1O43805 119 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 GPX1P07203 203 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 CRISP2P16562 243 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 M6PRP20645 277 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 FFAR4Q5NUL3 377 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 LINC00477Q96M19 166 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 ATP5SQ99766 215 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 WFDC1Q9HC57 220 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 MBD2Q9UBB5 411 aa8.36□□□□□ -1.07
SSBP3-210ENST00000525990 OR7C2O60412 319 aa8.35□□□□□ -1.07
SSBP3-210ENST00000525990 CCL18P55774 89 aa8.35□□□□□ -1.07
SSBP3-210ENST00000525990 FAM3BP58499 235 aaPredicted RBP8.35□□□□□ -1.07
SSBP3-210ENST00000525990 CYCSP99999 105 aaKnown RBP8.35□□□□□ -1.07
SSBP3-210ENST00000525990 DAZ2Q13117 558 aaKnown RBP8.35□□□□□ -1.07
SSBP3-210ENST00000525990 ESRGQ1W209 222 aa8.35□□□□□ -1.07
SSBP3-210ENST00000525990 EIF4E3Q8N5X7 224 aaKnown RBP8.35□□□□□ -1.07
SSBP3-210ENST00000525990 RXFP4Q8TDU9 374 aa8.35□□□□□ -1.07
SSBP3-210ENST00000525990 VSIG2Q96IQ7 327 aa8.35□□□□□ -1.07
SSBP3-210ENST00000525990 MRPL32Q9BYC8 188 aaKnown RBP8.35□□□□□ -1.07
SSBP3-210ENST00000525990 ZNF492Q9P255 531 aa8.35□□□□□ -1.07
SSBP3-210ENST00000525990 PCLOQ9Y6V0 5065 aa8.35□□□□□ -1.07
SSBP3-210ENST00000525990 DYNC1H1Q14204 4646 aaKnown RBP8.34□□□□□ -1.07
SSBP3-210ENST00000525990 TRGV1A0A0A0MS02 117 aa8.34□□□□□ -1.07
SSBP3-210ENST00000525990 IGHV3-53P01767 116 aa8.34□□□□□ -1.07
SSBP3-210ENST00000525990 RPL12P30050 165 aaKnown RBP8.34□□□□□ -1.07
SSBP3-210ENST00000525990 RANP62826 216 aaKnown RBP8.34□□□□□ -1.07
SSBP3-210ENST00000525990 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
SSBP3-210ENST00000525990 TMEM78Q5T7P6 136 aa8.34□□□□□ -1.07
SSBP3-210ENST00000525990 Q9H3A6 140 aa8.34□□□□□ -1.07
SSBP3-210ENST00000525990 MRPL16Q9NX20 251 aaKnown RBP8.34□□□□□ -1.07
SSBP3-210ENST00000525990 TRGV2A0A075B6R0 118 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 A0A096LPF7 62 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 C17orf112F2Z3M2 114 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 ZNF138P52744 262 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 TCL1AP56279 114 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 ANXA2RQ3ZCQ2 193 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 SOHLH1Q5JUK2 328 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 MUC21Q5SSG8 566 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 C6orf223Q8N319 242 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 ZNF680Q8NEM1 530 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 LINC00467Q9BRT7 94 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 KCNIP2Q9NS61 270 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 DNAH11Q96DT5 4516 aa8.33□□□□□ -1.08
SSBP3-210ENST00000525990 IGHV1OR15-1A0A075B7D0 117 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 RGS13O14921 159 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 HMGB3O15347 200 aaKnown RBP8.32□□□□□ -1.08
SSBP3-210ENST00000525990 SPINK4O60575 86 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 MED14OSP0DP75 135 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 RAB2AP61019 212 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 HYLS1Q96M11 299 aa8.32□□□□□ -1.08
SSBP3-210ENST00000525990 Q9H8V8 135 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms