RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 TRAV26-1A0A087WT03 109 aa17.09■□□□□ 0.33
ROM1-203ENST00000525947 C7orf71A4D174 169 aa17.09■□□□□ 0.33
ROM1-203ENST00000525947 SLC25A5P05141 298 aaKnown RBP17.09■□□□□ 0.33
ROM1-203ENST00000525947 FAM122CQ6P4D5 195 aa17.09■□□□□ 0.33
ROM1-203ENST00000525947 FAM167A-AS1Q96KT0 104 aa17.09■□□□□ 0.33
ROM1-203ENST00000525947 AAMDCQ9H7C9 122 aa17.09■□□□□ 0.33
ROM1-203ENST00000525947 KIAA1109Q2LD37 5005 aa17.08■□□□□ 0.32
ROM1-203ENST00000525947 IGKV2-40A0A087WW87 121 aaPredicted RBP17.08■□□□□ 0.32
ROM1-203ENST00000525947 IGKV2D-40P01614 121 aaPredicted RBP17.08■□□□□ 0.32
ROM1-203ENST00000525947 HOXA5P20719 270 aa17.08■□□□□ 0.32
ROM1-203ENST00000525947 RNASE4P34096 147 aaKnown RBP17.08■□□□□ 0.32
ROM1-203ENST00000525947 PDE6HQ13956 83 aa17.08■□□□□ 0.32
ROM1-203ENST00000525947 GNPNAT1Q96EK6 184 aaPredicted RBP17.08■□□□□ 0.32
ROM1-203ENST00000525947 LINC00477Q96M19 166 aa17.08■□□□□ 0.32
ROM1-203ENST00000525947 NBDYA0A0U1RRE5 68 aa17.07■□□□□ 0.32
ROM1-203ENST00000525947 A6NHS1 94 aa17.07■□□□□ 0.32
ROM1-203ENST00000525947 PRAF2O60831 178 aa17.07■□□□□ 0.32
ROM1-203ENST00000525947 OR10J4P0C629 311 aa17.07■□□□□ 0.32
ROM1-203ENST00000525947 Q6ZTI0 123 aa17.07■□□□□ 0.32
ROM1-203ENST00000525947 WDR61Q9GZS3 305 aaKnown RBP17.07■□□□□ 0.32
ROM1-203ENST00000525947 OR51M1Q9H341 326 aa17.07■□□□□ 0.32
ROM1-203ENST00000525947 NBEAP1P0C6P0 100 aa17.06■□□□□ 0.32
ROM1-203ENST00000525947 H2BFSP57053 126 aa17.06■□□□□ 0.32
ROM1-203ENST00000525947 SSX7Q7RTT5 188 aa17.06■□□□□ 0.32
ROM1-203ENST00000525947 VGLL1Q99990 258 aa17.06■□□□□ 0.32
ROM1-203ENST00000525947 TMPRSS5Q9H3S3 457 aa17.06■□□□□ 0.32
ROM1-203ENST00000525947 GSN-AS1Q9NRJ2 163 aa17.06■□□□□ 0.32
ROM1-203ENST00000525947 KLLNB2CW77 178 aa17.05■□□□□ 0.32
ROM1-203ENST00000525947 GPX1P07203 203 aa17.05■□□□□ 0.32
ROM1-203ENST00000525947 M6PRP20645 277 aa17.05■□□□□ 0.32
ROM1-203ENST00000525947 CYCSP99999 105 aaKnown RBP17.05■□□□□ 0.32
ROM1-203ENST00000525947 PPP1R1CQ8WVI7 109 aa17.05■□□□□ 0.32
ROM1-203ENST00000525947 FAM19A4Q96LR4 140 aa17.05■□□□□ 0.32
ROM1-203ENST00000525947 PAXXQ9BUH6 204 aa17.05■□□□□ 0.32
ROM1-203ENST00000525947 PTTG2Q9NZH5 202 aa17.05■□□□□ 0.32
ROM1-203ENST00000525947 ZNF324O75467 553 aaPredicted RBP17.04■□□□□ 0.32
ROM1-203ENST00000525947 C9orf47Q6ZRZ4 202 aa17.04■□□□□ 0.32
ROM1-203ENST00000525947 RXFP4Q8TDU9 374 aa17.04■□□□□ 0.32
ROM1-203ENST00000525947 FXYD5Q96DB9 178 aa17.04■□□□□ 0.32
ROM1-203ENST00000525947 DAZ2Q13117 558 aaKnown RBP17.03■□□□□ 0.32
ROM1-203ENST00000525947 TMEM78Q5T7P6 136 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 PRR9Q5T870 116 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 Q6ZQT7 251 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 ZNF575Q86XF7 245 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 EIF4E3Q8N5X7 224 aaKnown RBP17.03■□□□□ 0.32
ROM1-203ENST00000525947 C11orf72Q8NBR9 251 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 PHYHIPLQ96FC7 376 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 MARVELD1Q9BSK0 173 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 MRPL32Q9BYC8 188 aaKnown RBP17.03■□□□□ 0.32
ROM1-203ENST00000525947 SMIM3Q9BZL3 60 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 FUT9Q9Y231 359 aa17.03■□□□□ 0.32
ROM1-203ENST00000525947 C17orf112F2Z3M2 114 aa17.02■□□□□ 0.32
ROM1-203ENST00000525947 SSNA1O43805 119 aa17.02■□□□□ 0.32
ROM1-203ENST00000525947 TNP2Q05952 138 aa17.02■□□□□ 0.32
ROM1-203ENST00000525947 KCNIP2Q9NS61 270 aa17.02■□□□□ 0.32
ROM1-203ENST00000525947 TP53TG3Q9ULZ0 132 aa17.02■□□□□ 0.32
ROM1-203ENST00000525947 KLF12Q9Y4X4 402 aa17.02■□□□□ 0.32
ROM1-203ENST00000525947 TRGV2A0A075B6R0 118 aa17.01■□□□□ 0.31
ROM1-203ENST00000525947 TRGV1A0A0A0MS02 117 aa17.01■□□□□ 0.31
ROM1-203ENST00000525947 OR7C2O60412 319 aa17.01■□□□□ 0.31
ROM1-203ENST00000525947 MED14OSP0DP75 135 aa17.01■□□□□ 0.31
ROM1-203ENST00000525947 C6orf223Q8N319 242 aa17.01■□□□□ 0.31
ROM1-203ENST00000525947 ZNF680Q8NEM1 530 aa17.01■□□□□ 0.31
ROM1-203ENST00000525947 ATP5SQ99766 215 aa17.01■□□□□ 0.31
ROM1-203ENST00000525947 RGS13O14921 159 aa17■□□□□ 0.31
ROM1-203ENST00000525947 MPC2O95563 127 aa17■□□□□ 0.31
ROM1-203ENST00000525947 CRISP2P16562 243 aa17■□□□□ 0.31
ROM1-203ENST00000525947 FFAR4Q5NUL3 377 aa17■□□□□ 0.31
ROM1-203ENST00000525947 ZFAND2AQ8N6M9 145 aa17■□□□□ 0.31
ROM1-203ENST00000525947 Q8TAT8 98 aa17■□□□□ 0.31
ROM1-203ENST00000525947 Q9H8V8 135 aa17■□□□□ 0.31
ROM1-203ENST00000525947 ZNF492Q9P255 531 aa17■□□□□ 0.31
ROM1-203ENST00000525947 HSPB11Q9Y547 144 aa17■□□□□ 0.31
ROM1-203ENST00000525947 EIF3GO75821 320 aaKnown RBP eCLIP16.99■□□□□ 0.31
ROM1-203ENST00000525947 RANP62826 216 aaKnown RBP16.99■□□□□ 0.31
ROM1-203ENST00000525947 ESRGQ1W209 222 aa16.99■□□□□ 0.31
ROM1-203ENST00000525947 DEFA1P59665 94 aa16.98■□□□□ 0.31
ROM1-203ENST00000525947 DEFA3P59666 94 aa16.98■□□□□ 0.31
ROM1-203ENST00000525947 ANXA2RQ3ZCQ2 193 aa16.98■□□□□ 0.31
ROM1-203ENST00000525947 ZNF503Q96F45 646 aa16.98■□□□□ 0.31
ROM1-203ENST00000525947 LINC00467Q9BRT7 94 aa16.98■□□□□ 0.31
ROM1-203ENST00000525947 RPL12P30050 165 aaKnown RBP16.97■□□□□ 0.31
ROM1-203ENST00000525947 ZNF138P52744 262 aa16.97■□□□□ 0.31
ROM1-203ENST00000525947 SCGB1C1Q8TD33 95 aa16.97■□□□□ 0.31
ROM1-203ENST00000525947 Q9H3A6 140 aa16.97■□□□□ 0.31
ROM1-203ENST00000525947 MBD2Q9UBB5 411 aa16.97■□□□□ 0.31
ROM1-203ENST00000525947 DYNC1H1Q14204 4646 aaKnown RBP16.97■□□□□ 0.31
ROM1-203ENST00000525947 IFNA5P01569 189 aa16.96■□□□□ 0.31
ROM1-203ENST00000525947 NMBP08949 121 aa16.96■□□□□ 0.31
ROM1-203ENST00000525947 TCL1AP56279 114 aa16.96■□□□□ 0.31
ROM1-203ENST00000525947 UBE2L3P68036 154 aaKnown RBP16.96■□□□□ 0.31
ROM1-203ENST00000525947 VSIG2Q96IQ7 327 aa16.96■□□□□ 0.31
ROM1-203ENST00000525947 MRPL16Q9NX20 251 aaKnown RBP16.96■□□□□ 0.31
ROM1-203ENST00000525947 IGHV1OR15-1A0A075B7D0 117 aa16.95■□□□□ 0.3
ROM1-203ENST00000525947 SPINK4O60575 86 aa16.95■□□□□ 0.3
ROM1-203ENST00000525947 IGHV3-53P01767 116 aa16.95■□□□□ 0.3
ROM1-203ENST00000525947 PET100P0DJ07 73 aa16.95■□□□□ 0.3
ROM1-203ENST00000525947 CSN1S1P47710 185 aa16.95■□□□□ 0.3
ROM1-203ENST00000525947 ARPC5LQ9BPX5 153 aa16.95■□□□□ 0.3
ROM1-203ENST00000525947 A0A096LPF7 62 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms