RNA–Protein interactions for RNA: ENST00000525303.5

TRAPPC4-206, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 654 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-206ENST00000525303 ZNF575Q86XF7 245 aa6.84□□□□□ -1.31
TRAPPC4-206ENST00000525303 UBE2DNLQ8IWF7 75 aa6.84□□□□□ -1.31
TRAPPC4-206ENST00000525303 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
TRAPPC4-206ENST00000525303 LINC00052Q96N35 136 aa6.84□□□□□ -1.31
TRAPPC4-206ENST00000525303 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
TRAPPC4-206ENST00000525303 ZNF331Q9NQX6 463 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC4-206ENST00000525303 ZNF586Q9NXT0 402 aa6.84□□□□□ -1.31
TRAPPC4-206ENST00000525303 MAP1LC3B2A6NCE7 125 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 H3BMM0 161 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 H3BQ15 152 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 OR10J4P0C629 311 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 SPART-AS1P0CW21 52 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 GCHFRP30047 84 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 SULT1A2P50226 295 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 PPT1P50897 306 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 EMP1P54849 157 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 ZNF705AQ6ZN79 300 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 ZNF738Q8NE65 137 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 FAM213BQ8TBF2 198 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 BLNKQ8WV28 456 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 FXYD5Q96DB9 178 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 SAT2Q96F10 170 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 NKX6-2Q9C056 277 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 MAP1LC3BQ9GZQ8 125 aa6.83□□□□□ -1.32
TRAPPC4-206ENST00000525303 IGHV3OR16-12A0A075B7B8 117 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 DUSP14O95147 198 aaKnown RBP6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 HBE1P02100 147 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 HLA-DRB4P13762 266 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 CSN1S1P47710 185 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 Q6ZR54 194 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 IQCF2Q8IXL9 164 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 ARL6IP6Q8N6S5 226 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 SUN5Q8TC36 379 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 RXFP4Q8TDU9 374 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 C17orf77Q96MU5 243 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 CLUHP3Q96NS8 147 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 NEU1Q99519 415 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 SAV1Q9H4B6 383 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 OTORQ9NRC9 128 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 ARL2-SNX15V9GYD0 113 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 HLA-DRB4X5D2U9 266 aa6.82□□□□□ -1.32
TRAPPC4-206ENST00000525303 TRAV8-2A0A0B4J237 113 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 TMEM189A5PLL7 270 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 ZNF705FA8MVS1 300 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 BOLA2-SMG1P6H3BVE0 249 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 SLC17A3O00476 420 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 HMGB3O15347 200 aaKnown RBP6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 IGKV3-20P01619 116 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 ZNF705DP0CH99 300 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 ZNF705BP0CI00 300 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 FXYD7P58549 80 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 DEFB1P60022 68 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 BLOC1S1P78537 153 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 ZNF726P1Q15940 193 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 SOHLH1Q5JUK2 328 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 GDF5OSQ5U4N7 250 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 RNF182Q8N6D2 247 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 OR10J6PQ8NGY7 276 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 CMTM2Q8TAZ6 248 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 SFT2D1Q8WV19 159 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 RPUSD4Q96CM3 377 aaKnown RBP6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 ZNF503Q96F45 646 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 Q9H3A6 140 aa6.81□□□□□ -1.32
TRAPPC4-206ENST00000525303 TRAV1-1A0A0B4J248 108 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 A0A0J9YX75 114 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 SERTM2A0A1B0GWG4 89 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 H3BTX0 84 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 NDUFB4O95168 129 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 IFNA7P01567 189 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 SNRPCP09234 159 aaKnown RBP6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 HTN3P15516 51 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 RANP62826 216 aaKnown RBP6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 ICAM4Q14773 271 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 FAM222AQ5U5X8 452 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 ALKAL2Q6UX46 152 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 SSX7Q7RTT5 188 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 FAM210BQ96KR6 192 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 C20orf173Q96LM9 149 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 TCEAL7Q9BRU2 100 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 NIPSNAP3BQ9BS92 247 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 PPP1R14DQ9NXH3 145 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 DKK2Q9UBU2 259 aa6.8□□□□□ -1.32
TRAPPC4-206ENST00000525303 RBAKDNA6NC62 111 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 PGPA6NDG6 321 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 K7EQM0 130 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 IFNA1P01562 189 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 FHITP49789 147 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 FGF8P55075 233 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 RNF212Q495C1 297 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 C1orf134Q5TEV5 83 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 EXOC3-AS1Q8N2X6 119 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 C5orf17Q8NAS9 161 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 OR8A1Q8NGG7 326 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 TXNDC17Q9BRA2 123 aa6.79□□□□□ -1.32
TRAPPC4-206ENST00000525303 LRP1BQ9NZR2 4599 aa6.78□□□□□ -1.32
TRAPPC4-206ENST00000525303 TEX48A0A1B0GUV7 120 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms