RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 Q8TAT8 98 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 LRRC20Q8TCA0 184 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 FAM110AQ9BQ89 295 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 OTORQ9NRC9 128 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 GNG13Q9P2W3 67 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 HLA-DRB4X5D2U9 266 aa4.73□□□□□ -1.65
CD44-214ENST00000525211 TRAV12-2A0A075B6T6 113 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 TRAV1-1A0A0B4J248 108 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 DIRC3C9JPN6 131 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 NPIPB6E9PJ23 425 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 J3KRW8 73 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 SLC25A5P05141 298 aaKnown RBP4.72□□□□□ -1.65
CD44-214ENST00000525211 ID1P41134 155 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 SNRPD3P62318 126 aaKnown RBP4.72□□□□□ -1.65
CD44-214ENST00000525211 PDE6HQ13956 83 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 GUK1Q16774 197 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 SPINK13Q1W4C9 94 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 DPPA3Q6W0C5 159 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 FOXI2Q6ZQN5 318 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 GOLT1AQ6ZVE7 132 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 C1orf158Q8N1D5 194 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 CSNK1G2-AS1Q8NCQ2 148 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 FAM19A4Q96LR4 140 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 SLC50A1Q9BRV3 221 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 TUBA4BQ9H853 241 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 TMEM167BQ9NRX6 74 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 XCL2Q9UBD3 114 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 EPDR1Q9UM22 224 aa4.72□□□□□ -1.65
CD44-214ENST00000525211 LOC102724200A0A096LPH7 203 aaPredicted RBP4.71□□□□□ -1.66
CD44-214ENST00000525211 A0A1W2PRE2 83 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 RAB5CP51148 216 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 PSG9Q00887 426 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 CST9LP1Q5W188 147 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 S100A7AQ86SG5 101 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 STHQ8IWL8 128 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 ZFAND2AQ8N6M9 145 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 MRPL53Q96EL3 112 aaKnown RBP4.71□□□□□ -1.66
CD44-214ENST00000525211 C8orf49Q96NF6 230 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 OVOL2Q9BRP0 275 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 DERL1Q9BUN8 251 aa4.71□□□□□ -1.66
CD44-214ENST00000525211 COL7A1Q02388 2944 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 LOC102723971A0A1B0GUV8 181 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 F6UZH7 168 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 CA1P00915 261 aaPredicted RBP4.7□□□□□ -1.66
CD44-214ENST00000525211 TCRAP04437 139 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 S100A7P31151 101 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 ZNF80P51504 273 aaPredicted RBP4.7□□□□□ -1.66
CD44-214ENST00000525211 BTN1A1Q13410 526 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 DEFB135Q30KP9 77 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 EIF5AL1Q6IS14 154 aaKnown RBP4.7□□□□□ -1.66
CD44-214ENST00000525211 C9orf47Q6ZRZ4 202 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 ZNF575Q86XF7 245 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 LYPD1Q8N2G4 141 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 RXFP4Q8TDU9 374 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 C2CD4CQ8TF44 421 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 B9D2Q9BPU9 175 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 TM2D3Q9BRN9 247 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 CSTL1Q9H114 145 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 C11orf21Q9P2W6 132 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 PRELID1Q9Y255 219 aa4.7□□□□□ -1.66
CD44-214ENST00000525211 RAB19A4D1S5 217 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 C11orf94C9JXX5 98 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 PEX7O00628 323 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 DEFB4AO15263 64 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 SPRY2O43597 315 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 BCL2P10415 239 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 AZU1P20160 251 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 CRIP1P50238 77 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 CMC4P56277 68 aaPredicted RBP4.69□□□□□ -1.66
CD44-214ENST00000525211 BLOC1S1P78537 153 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 ZNF506Q5JVG8 444 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 GFI1BQ5VTD9 330 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 EBLN2Q6P2I7 272 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 C5orf17Q8NAS9 161 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 OR10J6PQ8NGY7 276 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 ZNF492Q9P255 531 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 ZMAT5Q9UDW3 170 aaKnown RBP4.69□□□□□ -1.66
CD44-214ENST00000525211 PSG8Q9UQ74 426 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 RNF24Q9Y225 148 aa4.69□□□□□ -1.66
CD44-214ENST00000525211 TRBV20OR9-2A0A075B6H5 130 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 KIR2DL5BA0A0G2JN68 375 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 KIR2DL5BA0A0G2JPC4 375 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 RBFOX3A6NFN3 312 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 PGPEP1LA6NFU8 196 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 ZNF705GA8MUZ8 300 aaPredicted RBP4.68□□□□□ -1.66
CD44-214ENST00000525211 ZNF324O75467 553 aaPredicted RBP4.68□□□□□ -1.66
CD44-214ENST00000525211 DUSP14O95147 198 aaKnown RBP4.68□□□□□ -1.66
CD44-214ENST00000525211 IFNA7P01567 189 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 IGLV2-8P01709 118 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 HBE1P02100 147 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 PLA2G1BP04054 148 aaKnown RBP4.68□□□□□ -1.66
CD44-214ENST00000525211 SRP19P09132 144 aaKnown RBP4.68□□□□□ -1.66
CD44-214ENST00000525211 ZNF138P52744 262 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 PMS2P11Q13670 270 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 PRNTQ86SH4 94 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 Q86TA4 180 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 KIR2DL5AQ8N109 375 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 TMEM75Q8N9X5 138 aa4.68□□□□□ -1.66
CD44-214ENST00000525211 NHLRC2Q8NBF2 726 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms