RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 CD300CQ08708 224 aa8.54□□□□□ -1.04
CLN8-207ENST00000524258 PMS2P11Q13670 270 aa8.54□□□□□ -1.04
CLN8-207ENST00000524258 LGALSLQ3ZCW2 172 aaPredicted RBP8.54□□□□□ -1.04
CLN8-207ENST00000524258 PRR9Q5T870 116 aa8.54□□□□□ -1.04
CLN8-207ENST00000524258 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
CLN8-207ENST00000524258 PHLDA1Q8WV24 401 aaPredicted RBP8.54□□□□□ -1.04
CLN8-207ENST00000524258 OTORQ9NRC9 128 aa8.54□□□□□ -1.04
CLN8-207ENST00000524258 PPP1R14DQ9NXH3 145 aa8.54□□□□□ -1.04
CLN8-207ENST00000524258 LOC102723971A0A1B0GUV8 181 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 A0A1B0GVG6 124 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 RBAKDNA6NC62 111 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 PGPA6NDG6 321 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 DIRC3C9JPN6 131 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 BCL2L11O43521 198 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 SLC25A5P05141 298 aaKnown RBP8.53□□□□□ -1.04
CLN8-207ENST00000524258 TMUB2Q71RG4 321 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 C20orf144Q9BQM9 153 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 ACTR3CQ9C0K3 210 aaPredicted RBP8.53□□□□□ -1.04
CLN8-207ENST00000524258 ZNF492Q9P255 531 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 DKK2Q9UBU2 259 aa8.53□□□□□ -1.04
CLN8-207ENST00000524258 TRBV7-9A0A0J9YWB2 115 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 CTXND1A0A1B0GTU2 59 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 TMEM189A5PLL7 270 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 CXorf65A6NEN9 183 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 HBE1P02100 147 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 C1QBP02746 253 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 NMBP08949 121 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 SEC11BP0C7V7 166 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 LEPP41159 167 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 FHITP49789 147 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 TAS2R60P59551 318 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 RRN3P1Q2M238 152 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 Q6ZQT7 251 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 Q6ZTC4 211 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 TMEM256Q8N2U0 113 aa8.52□□□□□ -1.05
CLN8-207ENST00000524258 LCE6AA0A183 80 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 GGTLC3B5MD39 225 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 CXorf1O96002 111 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 ZNF138P52744 262 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 Q8TAT8 98 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 STOML3Q8TAV4 291 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 RNASE8Q8TDE3 154 aaKnown RBP8.51□□□□□ -1.05
CLN8-207ENST00000524258 TVP23CQ96ET8 276 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 LINC01587Q99440 93 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 TMPRSS5Q9H3S3 457 aa8.51□□□□□ -1.05
CLN8-207ENST00000524258 YTHDF2Q9Y5A9 579 aaKnown RBP8.51□□□□□ -1.05
CLN8-207ENST00000524258 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 TRAV12-3A0A0B4J271 114 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 C7orf71A4D174 169 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 NUPR2A6NF83 97 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 H7BYZ3 331 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 GNG5P63218 68 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 BTN1A1Q13410 526 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 AKR1C8PQ5T2L2 129 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 ZNF767PQ75MW2 155 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 RXFP4Q8TDU9 374 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 TMED6Q8WW62 240 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 MBD3L1Q8WWY6 194 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 LINC00467Q9BRT7 94 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 TMEM208Q9BTX3 173 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 ZNF471Q9BX82 626 aaPredicted RBP8.5□□□□□ -1.05
CLN8-207ENST00000524258 TMEM167BQ9NRX6 74 aa8.5□□□□□ -1.05
CLN8-207ENST00000524258 KMT2AQ03164 3969 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 A0A1W2PRE2 83 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 J3KRW8 73 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 SPART-AS1P0CW21 52 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 CSN1S1P47710 185 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 EMP1P54849 157 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 FGF8P55075 233 aaPredicted RBP8.49□□□□□ -1.05
CLN8-207ENST00000524258 TMEM78Q5T7P6 136 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 HYLS1Q96M11 299 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
CLN8-207ENST00000524258 TRAV8-1A0A0A6YYK1 113 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 KANTRA0A1W2PQU2 76 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 SUMO1P63165 101 aaKnown RBP8.48□□□□□ -1.05
CLN8-207ENST00000524258 ZNF493Q6ZR52 646 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 GOLT1AQ6ZVE7 132 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 CCDC28AQ8IWP9 274 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 LINC00612Q8N6U2 182 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 C5orf17Q8NAS9 161 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 C11orf72Q8NBR9 251 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 EPDR1Q9UM22 224 aa8.48□□□□□ -1.05
CLN8-207ENST00000524258 DNAH6Q9C0G6 4158 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 MAP1LC3B2A6NCE7 125 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 FAM74A7A6NL05 159 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 LYRM9A8MSI8 78 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 UMAD1C9J7I0 102 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 C11orf94C9JXX5 98 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 TCRAP04437 139 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 RNASE4P34096 147 aaKnown RBP8.47□□□□□ -1.05
CLN8-207ENST00000524258 Q6AWC8 147 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 AKAP14Q86UN6 197 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 C9orf62Q8N4C0 152 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 TMEM263Q8WUH6 116 aaKnown RBP8.47□□□□□ -1.05
CLN8-207ENST00000524258 PYGO2Q9BRQ0 406 aa8.47□□□□□ -1.05
CLN8-207ENST00000524258 NIPSNAP3BQ9BS92 247 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms