RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 TRGV2A0A075B6R0 118 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 TRAV26-1A0A087WT03 109 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 GAGE12BA1L429 117 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 GAGE7O76087 117 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 SIX6O95475 246 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 GAGE12FP0CL80 117 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 GAGE12GP0CL81 117 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 GAGE12IP0CL82 117 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 DAZ2Q13117 558 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 IL15RAQ13261 267 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 SSX7Q7RTT5 188 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 C6orf223Q8N319 242 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 ZNRF2Q8NHG8 242 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 THAP6Q8TBB0 222 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 RXFP4Q8TDU9 374 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 BLNKQ8WV28 456 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 ASB13Q8WXK3 278 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 LINC00477Q96M19 166 aa6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 MRPL32Q9BYC8 188 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.42
CTNNA1-240ENST00000523912 M0R3E3 92 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 RGS13O14921 159 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 NMBP08949 121 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 PYYP10082 97 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 RNASE4P34096 147 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 CSN1S1P47710 185 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 KIR3DS1Q14943 382 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 LRRC37A5PQ49AS3 106 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 EIF4E3Q8N5X7 224 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 LINC00612Q8N6U2 182 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 ARPC5LQ9BPX5 153 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 PAXXQ9BUH6 204 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 SLC25A2Q9BXI2 301 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 LINC00588Q9Y4M8 146 aa6.2□□□□□ -1.42
CTNNA1-240ENST00000523912 TRGV1A0A0A0MS02 117 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 A0A0J9YY99 117 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 KLLNB2CW77 178 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 H3BNG1 76 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 OR7C2O60412 319 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 NDUFB4O95168 129 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 IFNA5P01569 189 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 GPX1P07203 203 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 GIPP09681 153 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 TAS2R45P59539 299 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 UBE2L3P68036 154 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 ERCC8Q13216 396 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 BTN1A1Q13410 526 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 ICAM4Q14773 271 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 ANXA2RQ3ZCQ2 193 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 GCSAMLQ5JQS6 135 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 FAM122CQ6P4D5 195 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 MIR17HGQ75NE6 70 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 PPP1R1CQ8WVI7 109 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 ATP5SQ99766 215 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 LINC00467Q9BRT7 94 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 OR51M1Q9H341 326 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 TMPRSS5Q9H3S3 457 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 FUT9Q9Y231 359 aa6.19□□□□□ -1.42
CTNNA1-240ENST00000523912 IGKV2-40A0A087WW87 121 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 TRBV7-9A0A0J9YWB2 115 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 IGKV2D-40P01614 121 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 NBEAP1P0C6P0 100 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 CRISP2P16562 243 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 NHLH2Q02577 135 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 KHDC3LQ587J8 217 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 C9orf47Q6ZRZ4 202 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 Q6ZTI0 123 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 SCGB1C1Q8TD33 95 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 C18orf15Q96N68 181 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 AGPAT4-IT1Q9H0P7 198 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 GSN-AS1Q9NRJ2 163 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 OR5AC2Q9NZP5 309 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 MBD2Q9UBB5 411 aa6.18□□□□□ -1.42
CTNNA1-240ENST00000523912 IGHV1OR15-1A0A075B7D0 117 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 A0A1W2PPQ1 181 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 RBAKDNA6NC62 111 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 C16orf90A8MZG2 172 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 MPC2O95563 127 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 OR10J4P0C629 311 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 BTF3P20290 206 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 HOXA5P20719 270 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 ZNF138P52744 262 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 TCL1AP56279 114 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 CD300CQ08708 224 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 ZNF415Q09FC8 603 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 IBA57Q5T440 356 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 Q6ZNX1 250 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 LYPD1Q8N2G4 141 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 C11orf72Q8NBR9 251 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 FAM19A4Q96LR4 140 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 Q9H8V8 135 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 MRPS16Q9Y3D3 137 aaKnown RBP6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 NACAE9PAV3 2078 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 RYR1P21817 5038 aa6.17□□□□□ -1.42
CTNNA1-240ENST00000523912 H0YIZ8 118 aa6.16□□□□□ -1.42
CTNNA1-240ENST00000523912 SPINK4O60575 86 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms