RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288		Q6ZRM9	215 aa		3.09	□□□□□ -1.92
FAM49B-225	ENST00000523288	PDPN	Q86YL7	162 aa		3.09	□□□□□ -1.92
FAM49B-225	ENST00000523288	PRSS33	Q8NF86	280 aa		3.09	□□□□□ -1.92
FAM49B-225	ENST00000523288	KLF14	Q8TD94	323 aa	Predicted RBP	3.09	□□□□□ -1.92
FAM49B-225	ENST00000523288	TP73-AS1	Q9UF72	201 aa		3.09	□□□□□ -1.92
FAM49B-225	ENST00000523288	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	3.09	□□□□□ -1.92
FAM49B-225	ENST00000523288	PKDREJ	Q9NTG1	2253 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	RAI1	Q7Z5J4	1906 aa	Predicted RBP	3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288		A8MWL6	223 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288		A8MWV9	139 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	LOX	P28300	417 aa	Predicted RBP	3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	INSL3	P51460	131 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	RNF144B	Q7Z419	303 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	C9orf106	Q8NAJ2	232 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	CYYR1	Q96J86	154 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	KIR2DL4	Q99706	377 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	MGST2	Q99735	147 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	HDHD3	Q9BSH5	251 aa	Predicted RBP	3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	RPP21	Q9H633	154 aa	Known RBP	3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGHV3-35	A0A0C4DH35	117 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	ATP5L	O75964	103 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	CECR9	P0C854	216 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	GLRX	P35754	106 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	UBE2D1	P51668	147 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288		Q5XG85	94 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	LINC00173	Q6ZV60	143 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	FMC1	Q96HJ9	113 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	SRXN1	Q9BYN0	137 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	WI2-2373I1.2	A0A1W2PRP0	233 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	LYNX1	G3V0Z9	82 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	NPY	P01303	97 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	PRB1	P04280	392 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	LYNX1	P0DP58	116 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	COL8A2	P25067	703 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	RPL27A	P46776	148 aa	Known RBP	3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	PLEKHB2	Q96CS7	222 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	SGK494	Q96LW2	274 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	ODF3	Q96PU9	254 aa		3.08	□□□□□ -1.92
FAM49B-225	ENST00000523288	TRAV12-1	A0A0B4J245	112 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	MYMX	A0A1B0GTQ4	84 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	HOXA3	O43365	443 aa	Predicted RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	HOXB4	P17483	251 aa	Predicted RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	FCER1G	P30273	86 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	ZNF137P	P52743	207 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	PIGY	Q3MUY2	71 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	ZCCHC24	Q8N2G6	241 aa	Known RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	CCL28	Q9NRJ3	127 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	C21orf62	Q9NYP8	219 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	LRP4	O75096	1905 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	CHD8	Q9HCK8	2581 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288		A0A096LNJ9	63 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGKV1D-13	A0A0B4J2D9	117 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	LTA	P01374	205 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGKV1-13	P0DP09	117 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	SLC25A16	P16260	332 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	NBL1	P41271	181 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	TCF15	Q12870	199 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	HCP5	Q6MZN7	132 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	C1orf158	Q8N1D5	194 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	FAM169B	Q8N8A8	192 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	OR1L8	Q8NGR8	309 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	FOXA2	Q9Y261	457 aa	Predicted RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	WNK2	Q9Y3S1	2297 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGHV3OR16-13	A0A075B7E8	117 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGKV3D-11	A0A0A0MRZ8	115 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGLV3-32	A0A0A0MS00	114 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGHV3-74	A0A0B4J1X5	117 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	LY6L	H3BQJ8	138 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGKV3-20	P01619	116 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	HBD	P02042	147 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGKV3-11	P04433	115 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	EMP1	P54849	157 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	FAM201A	Q5SY85	155 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	ZNF474	Q6S9Z5	364 aa	Predicted RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	HHLA3	Q9XRX5	114 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	MED13L	Q71F56	2210 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	SCN10A	Q9Y5Y9	1956 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	TRAV40	A0A0B4J280	105 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	NTN3	O00634	580 aa	Predicted RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	SS18L1	O75177	396 aa	Predicted RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	TRGV3	P03979	118 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	IL4	P05112	153 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	SCGB1C2	P0DMR2	95 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	FGF12	P61328	243 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	MRPL14	Q6P1L8	145 aa	Known RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288		Q6ZR03	302 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	ZNF329	Q86UD4	541 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	MAPK1IP1L	Q8NDC0	245 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	LEAP2	Q969E1	77 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	C16orf92	Q96LL3	132 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	METTL26	Q96S19	204 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	RNASE7	Q9H1E1	156 aa	Known RBP	3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	PRND	Q9UKY0	176 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	DOPEY1	Q5JWR5	2465 aa		3.07	□□□□□ -1.92
FAM49B-225	ENST00000523288	TRBV25-1	A0A075B6N4	114 aa		3.06	□□□□□ -1.92
FAM49B-225	ENST00000523288	TRAV8-4	A0A0B4J246	113 aa		3.06	□□□□□ -1.92
FAM49B-225	ENST00000523288	IGKV1-6	A0A0C4DH72	117 aa		3.06	□□□□□ -1.92
FAM49B-225	ENST00000523288	CGB1	A6NKQ9	187 aa		3.06	□□□□□ -1.92
FAM49B-225	ENST00000523288	INS-IGF2	F8WCM5	200 aa		3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 95 ms