RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 IGLC2P0DOY2 106 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 CRISP2P16562 243 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 RPS19P39019 145 aaKnown RBP8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 SELENOTP62341 195 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 BPIFA4PQ86YQ2 179 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 NRG4Q8WWG1 115 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 CNBD2Q96M20 576 aa8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.88□□□□□ -0.99
NKX3-1-202ENST00000523261 RAB3DO95716 219 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 GATA1P15976 413 aaPredicted RBP8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 KRTAP10-8P60410 259 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 SURF2Q15527 256 aaPredicted RBP8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 TOR2AQ5JU69 321 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 ZFAND2AQ8N6M9 145 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 OR52I2Q8NH67 350 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 LINC00477Q96M19 166 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 AGPAT4-IT1Q9H0P7 198 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 MTFP1Q9UDX5 166 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 GPR132Q9UNW8 380 aa8.87□□□□□ -0.99
NKX3-1-202ENST00000523261 TRAV8-1A0A0A6YYK1 113 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 SMCO3A2RU48 225 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 PANO1I0J062 215 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 NMBP08949 121 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 LINC00305Q7Z4B0 112 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 RMI2Q96E14 147 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 DNAJC30Q96LL9 226 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 COMMD3Q9UBI1 195 aa8.86□□□□□ -0.99
NKX3-1-202ENST00000523261 IGHV3-16A0A0C4DH30 117 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 A0A0J9YXV3 536 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 A0A0U1RQV1 116 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 GGTLC3B5MD39 225 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 M0R3E3 92 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 RPP30P78346 268 aaKnown RBP8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 FFAR4Q5NUL3 377 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 FAAP20Q6NZ36 180 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 TMEM229BQ8NBD8 167 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 CIB3Q96Q77 187 aaPredicted RBP8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 SPXQ9BT56 116 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 GTSF1LQ9H1H1 148 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 KCNIP3Q9Y2W7 256 aa8.85□□□□□ -0.99
NKX3-1-202ENST00000523261 IGKV2D-24A0A075B6R9 120 aa8.84□□□□□ -0.99
NKX3-1-202ENST00000523261 FABP12A6NFH5 140 aa8.84□□□□□ -0.99
NKX3-1-202ENST00000523261 K7EPK0 472 aa8.84□□□□□ -0.99
NKX3-1-202ENST00000523261 SPANXN5Q5MJ07 72 aa8.84□□□□□ -0.99
NKX3-1-202ENST00000523261 FAM122CQ6P4D5 195 aa8.84□□□□□ -0.99
NKX3-1-202ENST00000523261 OR51S1Q8NGJ8 323 aa8.84□□□□□ -0.99
NKX3-1-202ENST00000523261 MRPL53Q96EL3 112 aaKnown RBP8.84□□□□□ -0.99
NKX3-1-202ENST00000523261 H3BP45 60 aa8.83□□□□□ -1
NKX3-1-202ENST00000523261 WRBO00258 174 aa8.83□□□□□ -1
NKX3-1-202ENST00000523261 MED6O75586 246 aa8.83□□□□□ -1
NKX3-1-202ENST00000523261 TAS2R19P59542 299 aa8.83□□□□□ -1
NKX3-1-202ENST00000523261 PXDC1Q5TGL8 231 aa8.83□□□□□ -1
NKX3-1-202ENST00000523261 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
NKX3-1-202ENST00000523261 SRRQ9GZT4 340 aa8.83□□□□□ -1
NKX3-1-202ENST00000523261 SYNGR2O43760 224 aa8.82□□□□□ -1
NKX3-1-202ENST00000523261 GUK1Q16774 197 aa8.82□□□□□ -1
NKX3-1-202ENST00000523261 C14orf177Q52M58 125 aa8.82□□□□□ -1
NKX3-1-202ENST00000523261 MUC21Q5SSG8 566 aa8.82□□□□□ -1
NKX3-1-202ENST00000523261 HPGDSO60760 199 aa8.81□□□□□ -1
NKX3-1-202ENST00000523261 SLC38A11Q08AI6 406 aa8.81□□□□□ -1
NKX3-1-202ENST00000523261 VWC2Q2TAL6 325 aa8.81□□□□□ -1
NKX3-1-202ENST00000523261 STRAPQ9Y3F4 350 aaKnown RBP8.81□□□□□ -1
NKX3-1-202ENST00000523261 ZNF253O75346 499 aa8.8□□□□□ -1
NKX3-1-202ENST00000523261 TMEM183BQ1AE95 376 aa8.8□□□□□ -1
NKX3-1-202ENST00000523261 TMEM183AQ8IXX5 376 aa8.8□□□□□ -1
NKX3-1-202ENST00000523261 C9orf163Q8N9P6 203 aa8.8□□□□□ -1
NKX3-1-202ENST00000523261 PRADC1Q9BSG0 188 aa8.8□□□□□ -1
NKX3-1-202ENST00000523261 COX7A2P2O60397 106 aa8.79□□□□□ -1
NKX3-1-202ENST00000523261 SLC25A6P12236 298 aa8.79□□□□□ -1
NKX3-1-202ENST00000523261 SRPXP78539 464 aa8.79□□□□□ -1
NKX3-1-202ENST00000523261 RHOHQ15669 191 aa8.79□□□□□ -1
NKX3-1-202ENST00000523261 WDR73Q6P4I2 378 aa8.79□□□□□ -1
NKX3-1-202ENST00000523261 YIPF6Q96EC8 236 aa8.79□□□□□ -1
NKX3-1-202ENST00000523261 IGKV2-40A0A087WW87 121 aaPredicted RBP8.78□□□□□ -1
NKX3-1-202ENST00000523261 TRBV6-4A0A1B0GX49 114 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 DUXBA0A1W2PPF3 345 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 FBLL1A6NHQ2 334 aaKnown RBP8.78□□□□□ -1
NKX3-1-202ENST00000523261 DISC1C4P0D8 188 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 M0R2P5 195 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 GOSR2O14653 212 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 IGKV2D-40P01614 121 aaPredicted RBP8.78□□□□□ -1
NKX3-1-202ENST00000523261 UBE2MP61081 183 aaKnown RBP8.78□□□□□ -1
NKX3-1-202ENST00000523261 RRAS2P62070 204 aaPredicted RBP8.78□□□□□ -1
NKX3-1-202ENST00000523261 CIRBPQ14011 172 aaKnown RBP8.78□□□□□ -1
NKX3-1-202ENST00000523261 BAK1Q16611 211 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 TMEM78Q5T7P6 136 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 ATRAIDQ6UW56 229 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 NPVFQ9HCQ7 196 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 ZNF492Q9P255 531 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 PRELID1Q9Y255 219 aa8.78□□□□□ -1
NKX3-1-202ENST00000523261 TRGV11A0A075B6L2 103 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 TRBV19A0A075B6N1 114 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 ANKRD65E5RJM6 399 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 NDUFB4O95168 129 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 OR10J4P0C629 311 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 LSM3P62310 102 aaKnown RBP8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 POLR2GP62487 172 aaKnown RBP eCLIP8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 C10orf113Q5VZT2 155 aa8.77□□□□□ -1.01
NKX3-1-202ENST00000523261 SDIM1Q6ZPB5 146 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms