RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 PSG3Q16557 428 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 TTC32Q5I0X7 151 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 CYP2G1PQ6ZSU1 146 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 OR10J6PQ8NGY7 276 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 Q9H3A6 140 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 SMDT1Q9H4I9 107 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 SMCO4Q9NRQ5 59 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 CYTL1Q9NRR1 136 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 UQCC1Q9NVA1 299 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 HIGD1AQ9Y241 93 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 LINC00588Q9Y4M8 146 aa6.55□□□□□ -1.36
SDC2-207ENST00000522911 E5RGE8 158 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 F5H768 121 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 WRBO00258 174 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 HYPMO75409 117 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 ADAP1O75689 374 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 SEC11BP0C7V7 166 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 DEFB130BP0DP73 79 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 DEFB130AP0DP74 79 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 GATA2P23769 480 aaPredicted RBP6.54□□□□□ -1.36
SDC2-207ENST00000522911 RPL12P30050 165 aaKnown RBP6.54□□□□□ -1.36
SDC2-207ENST00000522911 DLK1P80370 383 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 AKR1C1Q04828 323 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 IL15RAQ13261 267 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 SPANXN5Q5MJ07 72 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 ATRAIDQ6UW56 229 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 LCN15Q6UWW0 184 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 LINC00518Q8N0U6 118 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 ZNF738Q8NE65 137 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 RXFP4Q8TDU9 374 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 TMED6Q8WW62 240 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 C18orf15Q96N68 181 aa6.54□□□□□ -1.36
SDC2-207ENST00000522911 FAM74A7A6NL05 159 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 NUDT3O95989 172 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 PRM2P04554 102 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 LINC00869P0C866 280 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 TAS2R30P59541 319 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 S100A10P60903 97 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 RAB5BP61020 215 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 RAB32Q13637 225 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 IAH1Q2TAA2 248 aaPredicted RBP6.53□□□□□ -1.36
SDC2-207ENST00000522911 FAM74A3Q4VXF1 159 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 TMEM14EPQ6UXP3 125 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 SSX7Q7RTT5 188 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 MAPKAPK5-AS1Q8N8E1 139 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 C15orf54Q8N8G6 183 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 ODF3Q96PU9 254 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 LINC01587Q99440 93 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 TCEAL7Q9BRU2 100 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 Q9H8V8 135 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 NPVFQ9HCQ7 196 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 ZNF331Q9NQX6 463 aaPredicted RBP6.53□□□□□ -1.36
SDC2-207ENST00000522911 GSKIPQ9P0R6 139 aa6.53□□□□□ -1.36
SDC2-207ENST00000522911 TRAV12-2A0A075B6T6 113 aa6.52□□□□□ -1.37
SDC2-207ENST00000522911 H0YIZ8 118 aa6.52□□□□□ -1.37
SDC2-207ENST00000522911 HIST1H1AQ02539 215 aaPredicted RBP6.52□□□□□ -1.37
SDC2-207ENST00000522911 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
SDC2-207ENST00000522911 IGFL4Q6B9Z1 124 aa6.52□□□□□ -1.37
SDC2-207ENST00000522911 TEPPQ6URK8 271 aa6.52□□□□□ -1.37
SDC2-207ENST00000522911 LYPD6BQ8NI32 183 aa6.52□□□□□ -1.37
SDC2-207ENST00000522911 RPUSD4Q96CM3 377 aaKnown RBP6.52□□□□□ -1.37
SDC2-207ENST00000522911 GGACTQ9BVM4 153 aa6.52□□□□□ -1.37
SDC2-207ENST00000522911 OR5AC2Q9NZP5 309 aa6.52□□□□□ -1.37
SDC2-207ENST00000522911 VPS13BQ7Z7G8 4022 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 UMAD1C9J7I0 102 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 H3BP45 60 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 S100A8P05109 93 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 HOXB5P09067 269 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 RAB2AP61019 212 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 POLR2GP62487 172 aaKnown RBP eCLIP6.51□□□□□ -1.37
SDC2-207ENST00000522911 RHOBP62745 196 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 ZNF266Q14584 549 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 CLINT1Q14677 625 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 PATE2Q6UY27 113 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 BPIFA4PQ86YQ2 179 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 GNPNAT1Q96EK6 184 aaPredicted RBP6.51□□□□□ -1.37
SDC2-207ENST00000522911 UHRF2Q96PU4 802 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 KRTAP1-5Q9BYS1 174 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 ARV1Q9H2C2 271 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 NOP10Q9NPE3 64 aaKnown RBP6.51□□□□□ -1.37
SDC2-207ENST00000522911 PSENENQ9NZ42 101 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 MRPS16Q9Y3D3 137 aaKnown RBP6.51□□□□□ -1.37
SDC2-207ENST00000522911 HERC1Q15751 4861 aa6.51□□□□□ -1.37
SDC2-207ENST00000522911 ZNF253O75346 499 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 MT-ND4LP03901 98 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 S100A9P06702 114 aaKnown RBP6.5□□□□□ -1.37
SDC2-207ENST00000522911 OR5G3P0C626 314 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 SFTA3P0C7M3 94 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 RHEBQ15382 184 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 RPL7L1Q6DKI1 246 aaKnown RBP6.5□□□□□ -1.37
SDC2-207ENST00000522911 OR10P1Q8NGE3 313 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 LINC00467Q9BRT7 94 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 SLC25A31Q9H0C2 315 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 PPP1R14DQ9NXH3 145 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 PXMP4Q9Y6I8 212 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 FAT1Q14517 4588 aa6.5□□□□□ -1.37
SDC2-207ENST00000522911 TRAV26-1A0A087WT03 109 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms