RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 TAS2R45P59539 299 aa12.7□□□□□ -0.38
CLK4-211ENST00000522556 CD300CQ08708 224 aa12.7□□□□□ -0.38
CLK4-211ENST00000522556 BTN1A1Q13410 526 aa12.7□□□□□ -0.38
CLK4-211ENST00000522556 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
CLK4-211ENST00000522556 APLNQ9ULZ1 77 aa12.7□□□□□ -0.38
CLK4-211ENST00000522556 DEFB131BA0A096LNP1 70 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 A0A1W2PPV4 95 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 LEPP41159 167 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 C9orf47Q6ZRZ4 202 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 ZFAND2AQ8N6M9 145 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 RAB24Q969Q5 203 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 NIPSNAP3BQ9BS92 247 aa12.69□□□□□ -0.38
CLK4-211ENST00000522556 IGHV4-4A0A075B6R2 117 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 KLLNB2CW77 178 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 TSPOP30536 169 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 TAS2R60P59551 318 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 ZNF726P1Q15940 193 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 TMEM256Q8N2U0 113 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 RNASE8Q8TDE3 154 aaKnown RBP12.68□□□□□ -0.38
CLK4-211ENST00000522556 HYLS1Q96M11 299 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 RPH3ALQ9UNE2 315 aa12.68□□□□□ -0.38
CLK4-211ENST00000522556 STAG3L2P0CL84 134 aa12.67□□□□□ -0.38
CLK4-211ENST00000522556 STAG3L3P0CL85 134 aa12.67□□□□□ -0.38
CLK4-211ENST00000522556 HTN3P15516 51 aa12.67□□□□□ -0.38
CLK4-211ENST00000522556 GNG5P63218 68 aa12.67□□□□□ -0.38
CLK4-211ENST00000522556 PQLC2Q6ZP29 291 aa12.67□□□□□ -0.38
CLK4-211ENST00000522556 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
CLK4-211ENST00000522556 C7orf71A4D174 169 aa12.66□□□□□ -0.38
CLK4-211ENST00000522556 H7BYZ3 331 aa12.66□□□□□ -0.38
CLK4-211ENST00000522556 LINC00477Q96M19 166 aa12.66□□□□□ -0.38
CLK4-211ENST00000522556 C20orf144Q9BQM9 153 aa12.66□□□□□ -0.38
CLK4-211ENST00000522556 BORCS7-ASMTA0A0B4J1R7 106 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 PGPA6NDG6 321 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 DIRC3C9JPN6 131 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 CRISP2P16562 243 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 GCHFRP30047 84 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 RNASE4P34096 147 aaKnown RBP12.65□□□□□ -0.38
CLK4-211ENST00000522556 DAD1P61803 113 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 SERF2P84101 59 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 TMEM78Q5T7P6 136 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 LYPD1Q8N2G4 141 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 C16orf74Q96GX8 76 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 OTORQ9NRC9 128 aa12.65□□□□□ -0.38
CLK4-211ENST00000522556 ZNF324O75467 553 aaPredicted RBP12.64□□□□□ -0.39
CLK4-211ENST00000522556 SLC25A5P05141 298 aaKnown RBP12.64□□□□□ -0.39
CLK4-211ENST00000522556 DEFB130BP0DP73 79 aa12.64□□□□□ -0.39
CLK4-211ENST00000522556 DEFB130AP0DP74 79 aa12.64□□□□□ -0.39
CLK4-211ENST00000522556 TMEM263Q8WUH6 116 aaKnown RBP12.64□□□□□ -0.39
CLK4-211ENST00000522556 GNPNAT1Q96EK6 184 aaPredicted RBP12.64□□□□□ -0.39
CLK4-211ENST00000522556 NOP10Q9NPE3 64 aaKnown RBP12.64□□□□□ -0.39
CLK4-211ENST00000522556 TRAV8-1A0A0A6YYK1 113 aa12.63□□□□□ -0.39
CLK4-211ENST00000522556 CSN1S1P47710 185 aa12.63□□□□□ -0.39
CLK4-211ENST00000522556 ZNF138P52744 262 aa12.63□□□□□ -0.39
CLK4-211ENST00000522556 KCNRGQ8N5I3 272 aa12.63□□□□□ -0.39
CLK4-211ENST00000522556 ST6GAL2Q96JF0 529 aa12.63□□□□□ -0.39
CLK4-211ENST00000522556 TEX48A0A1B0GUV7 120 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 GPX1P07203 203 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 LGALS9CQ6DKI2 356 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 GOLT1AQ6ZVE7 132 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 SGK494Q96LW2 274 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 ACTR3CQ9C0K3 210 aaPredicted RBP12.62□□□□□ -0.39
CLK4-211ENST00000522556 TMPRSS5Q9H3S3 457 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
CLK4-211ENST00000522556 VPS13DQ5THJ4 4388 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 GGTLC3B5MD39 225 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 MBP02144 154 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 FGF8P55075 233 aaPredicted RBP12.61□□□□□ -0.39
CLK4-211ENST00000522556 ZNF345Q14585 488 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 IQCF2Q8IXL9 164 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 C11orf72Q8NBR9 251 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 SUN5Q8TC36 379 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 TVP23CQ96ET8 276 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 ARPC5LQ9BPX5 153 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 PYGO2Q9BRQ0 406 aa12.61□□□□□ -0.39
CLK4-211ENST00000522556 TAAR5O14804 337 aa12.6□□□□□ -0.39
CLK4-211ENST00000522556 FHITP49789 147 aa12.6□□□□□ -0.39
CLK4-211ENST00000522556 Q6ZNX1 250 aa12.6□□□□□ -0.39
CLK4-211ENST00000522556 ZNF493Q6ZR52 646 aa12.6□□□□□ -0.39
CLK4-211ENST00000522556 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
CLK4-211ENST00000522556 CTXND1A0A1B0GTU2 59 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 HMSDA8MTL9 139 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 F6UZH7 168 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 CXorf1O96002 111 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 TMEM88Q6PEY1 159 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 CMTM2Q8TAZ6 248 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 RXFP4Q8TDU9 374 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 GSN-AS1Q9NRJ2 163 aa12.59□□□□□ -0.39
CLK4-211ENST00000522556 BCL2L11O43521 198 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 NMBP08949 121 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 TCTAP57738 103 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 KMT2AQ03164 3969 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 MUC21Q5SSG8 566 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 AKR1C8PQ5T2L2 129 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 CCDC28AQ8IWP9 274 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 NDUFAF3Q9BU61 184 aa12.58□□□□□ -0.4
CLK4-211ENST00000522556 KLF12Q9Y4X4 402 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms