RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 LCNL1Q6ZST4 164 aa7.57□□□□□ -1.2
CTNNA1-230ENST00000521724 Q6ZUT4 128 aa7.57□□□□□ -1.2
CTNNA1-230ENST00000521724 MAPKAPK5-AS1Q8N8E1 139 aa7.57□□□□□ -1.2
CTNNA1-230ENST00000521724 TMEM133Q9H2Q1 129 aa7.57□□□□□ -1.2
CTNNA1-230ENST00000521724 SS18L2Q9UHA2 77 aa7.57□□□□□ -1.2
CTNNA1-230ENST00000521724 M0R3E3 92 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 IGLV2-23P01705 113 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 CD59P13987 128 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 DIAPH2-AS1Q14236 149 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 GAFA1Q96PS6 74 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 ERG28Q9UKR5 140 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 A8MZ25 164 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 ATP5LO75964 103 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 XGP55808 180 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 SIGLEC15Q6ZMC9 328 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 SCNM1Q9BWG6 230 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 RNF7Q9UBF6 113 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 SPTBN2O15020 2390 aa7.56□□□□□ -1.2
CTNNA1-230ENST00000521724 CDX4O14627 284 aaPredicted RBP7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 SH2D1AO60880 128 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 RBP4P02753 201 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 HLA-DRB4P13762 266 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 NFE4Q86UQ8 179 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 ATP6V0E2Q8NHE4 81 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 RASL11BQ9BPW5 248 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 NXT2Q9NPJ8 142 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 HLA-DRB4X5D2U9 266 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 DMXL2Q8TDJ6 3036 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 CEP250Q9BV73 2442 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 FAM90A27PA6NNH2 459 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 NCBP2LA6PVI3 153 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 ENSAO43768 121 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 IGLV1-44P01699 117 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 CFAP126Q5VTH2 177 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 C9orf106Q8NAJ2 232 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 TMEM158Q8WZ71 300 aa7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 MRPL35Q9NZE8 188 aaKnown RBP7.55□□□□□ -1.2
CTNNA1-230ENST00000521724 GVINP1Q7Z2Y8 2422 aa7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 CCL3L1P16619 93 aa7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 LYPD1Q8N2G4 141 aa7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 DLX4Q92988 240 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 RPEQ96AT9 228 aa7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 HOXA3O43365 443 aaPredicted RBP7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 GAS8-AS1O95177 125 aa7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 IL4P05112 153 aa7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 RPL27AP46776 148 aaKnown RBP7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 FHL3Q13643 280 aa7.54□□□□□ -1.2
CTNNA1-230ENST00000521724 AAMDCQ9H7C9 122 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 MSRB1Q9NZV6 116 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 ATMQ13315 3056 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 IGHV3-72A0A0B4J1Y9 119 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 K7EM74 188 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 CCL11P51671 97 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 PLGLAQ15195 96 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 Q6ZS92 163 aa7.53□□□□□ -1.2
CTNNA1-230ENST00000521724 TRBV7-3A0A075B6L6 115 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 LOC107984156A0A0G2JMH3 177 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 LINC01546A6NGU7 62 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 NDUFA3O95167 84 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 EGR2P11161 476 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 WT1P19544 449 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 GAGE5Q13069 117 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 GAGE6Q13070 117 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 PVRIGQ6DKI7 326 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 MORN3Q6PF18 240 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 SFTA2Q6UW10 78 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 ARL17AQ8IVW1 177 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 MYOZ3Q8TDC0 251 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 TMEM190Q8WZ59 177 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 SHANK2-AS3Q9BTD1 123 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 AKAP13Q12802 2813 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 A0A1W2PRX2 142 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 PRSS29PA6NIE9 313 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 PSMB2P49721 201 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 TNFAIP6P98066 277 aaPredicted RBP7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 MRGPRG-AS1Q2M3A8 158 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 PTH2Q96A98 100 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 ADGRG4Q8IZF6 3080 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 ZGRF1Q86YA3 2104 aa7.52□□□□□ -1.21
CTNNA1-230ENST00000521724 B5MCH6 92 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 FDCSPQ8NFU4 85 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 PPDPFLQ8WWR9 84 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 PROCRQ9UNN8 238 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 MALRD1Q5VYJ5 2156 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 RIF1Q5UIP0 2472 aaKnown RBP7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 M0R1B8 84 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 IGKV1-17P01599 117 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 ZNF883P0CG24 379 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 GATA1P15976 413 aaPredicted RBP7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 ZFAND6Q6FIF0 208 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 UFC1Q9Y3C8 167 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 PCNX1Q96RV3 2341 aa7.51□□□□□ -1.21
CTNNA1-230ENST00000521724 MBD3L4A6NDZ8 208 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 MBD3L3A6NE82 208 aaPredicted RBP7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 H3BRN7 92 aa7.5□□□□□ -1.21
CTNNA1-230ENST00000521724 ORM1P02763 201 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms