RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 OR4X2Q8NGF9 303 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 OR51G1Q8NGK1 321 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 OR1L4Q8NGR5 311 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 MBD3L1Q8WWY6 194 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 MARC2Q969Z3 335 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 FAM218AQ96MZ4 157 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 CHRDL1Q9BU40 450 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 MAP1LC3BQ9GZQ8 125 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
CLK4-207ENST00000520909 IGHV3OR16-8A0A075B7F1 116 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.85□□□□□ -1.95
CLK4-207ENST00000520909 TRAV1-1A0A0B4J248 108 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 TRAV5A0A0B4J249 113 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 A0A1W2PPQ1 181 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 WI2-2373I1.2A0A1W2PRP0 233 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 SNURFLB1AK76 121 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 PPP5D1E7EU14 171 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 UBE2CO00762 179 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 TGOLN2O43493 480 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 ZNF207O43670 478 aaKnown RBP2.85□□□□□ -1.95
CLK4-207ENST00000520909 OR7C2O60412 319 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 NDUFA7O95182 113 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 TRBV12-3P01733 135 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 IL4P05112 153 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 C8orf88P0DMB2 117 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 KIAA0141Q14154 515 aaPredicted RBP2.85□□□□□ -1.95
CLK4-207ENST00000520909 HAGHQ16775 308 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 FAM78BQ5VT40 261 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 REG3GQ6UW15 175 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 TOMM20LQ6UXN7 152 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 PATE2Q6UY27 113 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 IL34Q6ZMJ4 242 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 ZNF600Q6ZNG1 722 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 LINC00305Q7Z4B0 112 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 COMMD1Q8N668 190 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 ZNF491Q8N8L2 437 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 OR4F5Q8NH21 305 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 LINC01006Q8NI28 216 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 TMEM37Q8WXS4 190 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 ATP6V0BQ99437 205 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 PFDN5Q99471 154 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 RNF2Q99496 336 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 C20orf24Q9BUV8 137 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 C19orf24Q9BVV8 132 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 EIF5A2Q9GZV4 153 aaKnown RBP2.85□□□□□ -1.95
CLK4-207ENST00000520909 C16orf95Q9H693 158 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 TREM1Q9NP99 234 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 TECRQ9NZ01 308 aaKnown RBP2.85□□□□□ -1.95
CLK4-207ENST00000520909 GNG13Q9P2W3 67 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 PEF1Q9UBV8 284 aaKnown RBP2.85□□□□□ -1.95
CLK4-207ENST00000520909 FUT9Q9Y231 359 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 HIGD1AQ9Y241 93 aa2.85□□□□□ -1.95
CLK4-207ENST00000520909 PUS1Q9Y606 427 aaKnown RBP eCLIP2.85□□□□□ -1.95
CLK4-207ENST00000520909 CUBNO60494 3623 aa2.84□□□□□ -1.95
CLK4-207ENST00000520909 IGHV3-49A0A0A0MS15 119 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 ZNF320A2RRD8 509 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 CLPSL1A2RUU4 121 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 RAB19A4D1S5 217 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 RBFOX3A6NFN3 312 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 K7EQD1 137 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 GGCTO75223 188 aaKnown RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 ATP6V1G1O75348 118 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 CXorf1O96002 111 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 IFNA1P01562 189 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 SNRPCP09234 159 aaKnown RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 LGALS1P09382 135 aaKnown RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 OR10J4P0C629 311 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 STAG3L2P0CL84 134 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 STAG3L3P0CL85 134 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 ARL14EPLP0DKL9 152 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 CD28P10747 220 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 GCHFRP30047 84 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 TAS2R45P59539 299 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 PLP1P60201 277 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 UBE2G2P60604 165 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 PEA15Q15121 130 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 USF2Q15853 346 aaPredicted RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 GUK1Q16774 197 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 FAM106AQ4KMX7 169 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 KHDC3LQ587J8 217 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 LEMD1Q68G75 181 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 RBPMS2Q6ZRY4 209 aaKnown RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 S100A7AQ86SG5 101 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 LYPD6BQ8NI32 183 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 NARS2Q96I59 477 aaKnown RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 FAM167A-AS1Q96KT0 104 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 UBE2E2Q96LR5 201 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 FAM210AQ96ND0 272 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 METTL26Q96S19 204 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 RARRES2Q99969 163 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 SHANK2-AS3Q9BTD1 123 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 PAXXQ9BUH6 204 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 SCRT1Q9BWW7 348 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 SLC25A2Q9BXI2 301 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 MRPL32Q9BYC8 188 aaKnown RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 SLC25A39Q9BZJ4 359 aaPredicted RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 TMEM231Q9H6L2 316 aa2.84□□□□□ -1.96
CLK4-207ENST00000520909 MRPL27Q9P0M9 148 aaKnown RBP2.84□□□□□ -1.96
CLK4-207ENST00000520909 RABAC1Q9UI14 185 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms