RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 TCRAP04437 139 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 CECR9P0C854 216 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 CXCL12P48061 93 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 LOXL3P58215 753 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 WT1-ASQ06250 92 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 ADAMTS20P59510 1910 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 IGHV3OR16-13A0A075B7E8 117 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 IGHV3-74A0A0B4J1X5 117 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 MBD3L4A6NDZ8 208 aaPredicted RBP8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 MBD3L3A6NE82 208 aaPredicted RBP8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 MBD3L5A6NJ08 208 aaPredicted RBP8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 F8WDY8 70 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 DLL1O00548 723 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 GAS8-AS1O95177 125 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 SP9P0CG40 484 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 KLK5Q9Y337 293 aaPredicted RBP8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 OOSP1A8MZH6 123 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 IGLL5B9A064 214 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 RHODO00212 210 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 IGHV3-23P01764 117 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 LYZL1Q6UWQ5 148 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 PPDPFLQ8WWR9 84 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 LY6G6EA0A0G2JKS1 128 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 WIPF2Q8TF74 440 aaPredicted RBP8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 MSRB1Q9NZV6 116 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 FOXA2Q9Y261 457 aaPredicted RBP8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 MRPS17Q9Y2R5 130 aaKnown RBP8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 U3KQA8 63 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 TRGV5A0A0B4J1U4 118 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 J3QLI3 93 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 WIPF1O43516 503 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 ZNF688P0C7X2 276 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 FHL3Q13643 280 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 DSCAMO60469 2012 aa8.04□□□□□ -1.12
PDGFRB-207ENST00000520579 ATP5LO75964 103 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 ORM1P02763 201 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 LEPP41159 167 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 Q6ZQT7 251 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 MAFAQ8NHW3 353 aaPredicted RBP8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 RITA1Q96K30 269 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 LINC00477Q96M19 166 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 RASL11BQ9BPW5 248 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 PRADC1Q9BSG0 188 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 NPYP01303 97 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 NFE4Q86UQ8 179 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 IQCF6A8MYZ5 107 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 BDP1A6H8Y1 2624 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 IGKV3D-15A0A087WSY6 115 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 TRGV8A0A0C4DH27 118 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 NPIPB6E9PJ23 425 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 FGF6P10767 208 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 CNTFRP26992 372 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 ATP5L2Q7Z4Y8 100 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 WDR31Q8NA23 367 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 SAP25Q8TEE9 199 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 MRPL32Q9BYC8 188 aaKnown RBP8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 SPRR3Q9UBC9 169 aa8.03□□□□□ -1.12
PDGFRB-207ENST00000520579 ARHGAP32A7KAX9 2087 aa8.02□□□□□ -1.12
PDGFRB-207ENST00000520579 COL4A2P08572 1712 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 TCRBV4S1A1TA0A5B7 111 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 ZNF415Q09FC8 603 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 TMEM78Q5T7P6 136 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 FAM231DQ6ZW35 169 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 C21orf62Q9NYP8 219 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 IGKV2-40A0A087WW87 121 aaPredicted RBP8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 TRAV40A0A0B4J280 105 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 IGKV2D-40P01614 121 aaPredicted RBP8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 IGLC6P0CF74 106 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 MSMPQ1L6U9 139 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 C2CD3Q4AC94 2353 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 C17orf58Q2M2W7 97 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 Q86TA4 180 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 PIP4P2Q8N4L2 257 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 TMEM101Q96IK0 257 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 SIT1Q9Y3P8 196 aa8.02□□□□□ -1.13
PDGFRB-207ENST00000520579 SS18L1O75177 396 aaPredicted RBP8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 HBDP02042 147 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 RPL35AP18077 110 aaKnown RBP8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 UCNP55089 124 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 CRXO43186 299 aaPredicted RBP8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 IGHV3-66A0A0C4DH42 116 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 PRRG2O14669 202 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 NDUFS7O75251 213 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 CRLF1O75462 422 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 IL4P05112 153 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 COX7A1P24310 79 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 KIR2DS2P43631 304 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 CCL11P51671 97 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 HERVK_113P63121 156 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 SPANXA1Q9NS26 97 aa8.01□□□□□ -1.13
PDGFRB-207ENST00000520579 LAMA5O15230 3695 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 ZFHX2Q9C0A1 2572 aaPredicted RBP8□□□□□ -1.13
PDGFRB-207ENST00000520579 IGHV3-49A0A0A0MS15 119 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 SUB1P53999 127 aaKnown RBP eCLIP8□□□□□ -1.13
PDGFRB-207ENST00000520579 C4orf26Q17RF5 130 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 CR1LQ2VPA4 569 aa8□□□□□ -1.13
PDGFRB-207ENST00000520579 FAM90A1Q86YD7 464 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms