RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 MRPL27Q9P0M9 148 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 KLK9Q9UKQ9 250 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 COX11Q9Y6N1 276 aa4.36□□□□□ -1.71
CTNNA1-220ENST00000520260 ANK3Q12955 4377 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 TRBV20OR9-2A0A075B6H5 130 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 TRAV25A0A0B4J276 109 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 GRIFINA4D1Z8 144 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 HELTA6NFD8 242 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 C15orf62A8K5M9 175 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 FNDC10F2Z333 226 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 K7EMT4 169 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 HMGB3O15347 200 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 MT-CO2P00403 227 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 CLEC3BP05452 202 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 STAG3L2P0CL84 134 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 STAG3L3P0CL85 134 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 CBLN1P23435 193 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 GPR183P32249 361 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 TFPI2P48307 235 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 WT1-ASQ06250 92 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 BATFQ16520 125 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 TCTEX1D4Q5JR98 221 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 PVRIGQ6DKI7 326 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 CLEC19AQ6UXS0 136 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 OR10W1Q8NGF6 305 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 OCC1Q8TAD7 63 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF502Q8TBZ5 544 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 KCNS1Q96KK3 526 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 METTL26Q96S19 204 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 KLK15Q9H2R5 256 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 NRN1Q9NPD7 142 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 OSTCQ9NRP0 149 aa4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 FBN1P35555 2871 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-220ENST00000520260 IGHV4OR15-8A0A075B7B6 117 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 A0A087WW49 117 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 TRAV3A0A0B4J244 114 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 A0A1W2PPV4 95 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 OR2T8A6NH00 312 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 OR4C46A6NHA9 309 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 SNURFLB1AK76 121 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF324O75467 553 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 CXorf1O96002 111 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 TSPOP30536 169 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 SYNJ2BPP57105 145 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 KRTDAPP60985 99 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 KLF5Q13887 457 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 DEFB136Q30KP8 78 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 FBLN7Q53RD9 439 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 ASPHD1Q5U4P2 390 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 RASL11AQ6T310 242 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 Q6ZN92 141 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 TMEM136Q6ZRR5 245 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 SMIM15Q7Z3B0 74 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 NIT1Q86X76 327 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 STPG3Q8N7X2 389 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 TMEM116Q8NCL8 245 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 GPR82Q96P67 336 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 ALKBH7Q9BT30 221 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 ZNF256Q9Y2P7 627 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 V9GYV3 84 aa4.34□□□□□ -1.71
CTNNA1-220ENST00000520260 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 ADARB2-AS1A8MUL3 147 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 F2Z2F3 143 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 K7EN84 100 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 HLA-DQA1P01909 254 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 C3orf79P0CE67 100 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 RNASE2P10153 161 aaKnown RBP4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 GCHFRP30047 84 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 AMTP48728 403 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 KRTAP10-3P60369 221 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 SSBP2P81877 361 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 CD69Q07108 199 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 C10orf99Q6UWK7 81 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 TMEM190Q8WZ59 177 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 FANCD2OSQ96PS1 177 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 UHRF2Q96PU4 802 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 SPAG8Q99932 426 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 DERL1Q9BUN8 251 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 NPVFQ9HCQ7 196 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 RABAC1Q9UI14 185 aa4.33□□□□□ -1.72
CTNNA1-220ENST00000520260 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 PRSS46E5RG02 174 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 I3L2K1 104 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 K7EIM0 57 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 ISLRO14498 428 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 LINC00869P0C866 280 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 ARL14EPLP0DKL9 152 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 IGLL1P15814 213 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 SLURP1P55000 103 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 SNRPD3P62318 126 aaKnown RBP4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 RPL11P62913 178 aaKnown RBP4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 MRGPRG-AS1Q2M3A8 158 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 SPINK9Q5DT21 86 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 FAM162BQ5T6X4 162 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 KPRPQ5T749 579 aaPredicted RBP4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 SAMD5Q5TGI4 173 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 TEPPQ6URK8 271 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 OR4C5Q8NGB2 326 aa4.32□□□□□ -1.72
CTNNA1-220ENST00000520260 TSKUQ8WUA8 353 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms