RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 NEGR1Q7Z3B1 354 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 BCL6BQ8N143 479 aaPredicted RBP3.94□□□□□ -1.78
SDC2-204ENST00000519914 OR4F17Q8NGA8 305 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 BLNKQ8WV28 456 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 RNF125Q96EQ8 232 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 SPANXDQ9BXN6 97 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 SIRPDQ9H106 197 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 MRPL16Q9NX20 251 aaKnown RBP3.94□□□□□ -1.78
SDC2-204ENST00000519914 ONECUT1Q9UBC0 465 aa3.94□□□□□ -1.78
SDC2-204ENST00000519914 ARHGAP32A7KAX9 2087 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 AKAP13Q12802 2813 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 A0A087X0K7 114 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 SH2D7A6NKC9 451 aaPredicted RBP3.93□□□□□ -1.78
SDC2-204ENST00000519914 K7EQM0 130 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 SPINK4O60575 86 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 SCGB2A1O75556 95 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 EGR2P11161 476 aaPredicted RBP3.93□□□□□ -1.78
SDC2-204ENST00000519914 AZU1P20160 251 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 CRIP2P52943 208 aaPredicted RBP3.93□□□□□ -1.78
SDC2-204ENST00000519914 DLX1P56177 255 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 SLC35B1P78383 322 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 NDPQ00604 133 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 PSG9Q00887 426 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 HSD52Q0P140 79 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 GAGE5Q13069 117 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 GAGE6Q13070 117 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 PLGLAQ15195 96 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 TDRG1Q3Y452 100 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 VMO1Q7Z5L0 202 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 FAM110DQ8TAY7 271 aaPredicted RBP3.93□□□□□ -1.78
SDC2-204ENST00000519914 ARPC1AQ92747 370 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 DAZAP1Q96EP5 407 aaKnown RBP3.93□□□□□ -1.78
SDC2-204ENST00000519914 NPFFR1Q9GZQ6 430 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 MS4A6AQ9H2W1 248 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 THYN1Q9P016 225 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 PSG8Q9UQ74 426 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 U3KQK5 164 aa3.93□□□□□ -1.78
SDC2-204ENST00000519914 NBEAQ8NFP9 2946 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 TLN1Q9Y490 2541 aaKnown RBP3.92□□□□□ -1.78
SDC2-204ENST00000519914 TRAV26-1A0A087WT03 109 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 LOC102724200A0A096LPH7 203 aaPredicted RBP3.92□□□□□ -1.78
SDC2-204ENST00000519914 IGHV3-21A0A0B4J1V1 117 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 IGHV7-81A0A0B4J1V7 117 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 A0A1B0GUT8 65 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 GNG7O60262 68 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 HSBP1O75506 76 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 CNIH1O95406 144 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 BRI3O95415 125 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 IL4P05112 153 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 RPL7P18124 248 aaKnown RBP3.92□□□□□ -1.78
SDC2-204ENST00000519914 HINT1P49773 126 aaPredicted RBP3.92□□□□□ -1.78
SDC2-204ENST00000519914 CRIP1P50238 77 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 UBE2E1P51965 193 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 KRTDAPP60985 99 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 RIGQ13278 110 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 EBLN2Q6P2I7 272 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 UNQ5815/PRO19632Q6UWF5 114 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 GOLT1AQ6ZVE7 132 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 EXOC3-AS1Q8N2X6 119 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 CIARTQ8N365 385 aaPredicted RBP3.92□□□□□ -1.78
SDC2-204ENST00000519914 Q8N9W7 124 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 ZC2HC1AQ96GY0 325 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
SDC2-204ENST00000519914 C21orf62Q9NYP8 219 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 RABAC1Q9UI14 185 aa3.92□□□□□ -1.78
SDC2-204ENST00000519914 BOD1L1Q8NFC6 3051 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 TRAV8-1A0A0A6YYK1 113 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 A0A1W2PRD5 423 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 A0A1W2PRF3 423 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 A0A1W2PRM7 423 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 RBAKDNA6NC62 111 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 GAGE12HA6NDE8 117 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 LINC01546A6NGU7 62 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 H3BRM9 83 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 M0R2Z0 102 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 TAX1BP3O14907 124 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 IGHG4P01861 327 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 CTSGP08311 255 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 ZFP36P26651 326 aaKnown RBP3.91□□□□□ -1.78
SDC2-204ENST00000519914 EFNA4P52798 201 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 RIPPLY3P57055 190 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 HIST1H1AQ02539 215 aaPredicted RBP3.91□□□□□ -1.78
SDC2-204ENST00000519914 KLRD1Q13241 179 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 ODF1Q14990 250 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 C19orf54Q5BKX5 351 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 AMMECR1LQ6DCA0 310 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 SLC25A34Q6PIV7 304 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 SPATA12Q7Z6I5 190 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 PRNTQ86SH4 94 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 DYNAPQ8N1N2 210 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 ZNF502Q8TBZ5 544 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 ZNF418Q8TF45 676 aaPredicted RBP3.91□□□□□ -1.78
SDC2-204ENST00000519914 MRPL53Q96EL3 112 aaKnown RBP3.91□□□□□ -1.78
SDC2-204ENST00000519914 PGLYRP4Q96LB8 373 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 C17orf77Q96MU5 243 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 FAM103A1Q9BTL3 118 aaKnown RBP3.91□□□□□ -1.78
SDC2-204ENST00000519914 TPPP3Q9BW30 176 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 CNFNQ9BYD5 112 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 HILPDAQ9Y5L2 63 aa3.91□□□□□ -1.78
SDC2-204ENST00000519914 ATMQ13315 3056 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms