RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 VGLL1Q99990 258 aa13.06□□□□□ -0.32
IGHV3-52-201ENST00000519770 ZFP30Q9Y2G7 519 aa13.06□□□□□ -0.32
IGHV3-52-201ENST00000519770 KLF12Q9Y4X4 402 aa13.06□□□□□ -0.32
IGHV3-52-201ENST00000519770 TRBV6-1A0A0K0K1D8 114 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 PRB4P10163 310 aaPredicted RBP13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 HLA-DRB4P13762 266 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 TSPOP30536 169 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 NUTF2P61970 127 aaKnown RBP13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 EGFEM1PQ0D2K5 195 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 ERCC8Q13216 396 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 SAMD5Q5TGI4 173 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 LINC00479Q96M42 142 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 NIPSNAP3BQ9BS92 247 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 AGPAT4-IT1Q9H0P7 198 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 HLA-DRB4X5D2U9 266 aa13.05□□□□□ -0.32
IGHV3-52-201ENST00000519770 TRAV8-1A0A0A6YYK1 113 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 G3V4G9 280 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 IGKV3-20P01619 116 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 LEPP41159 167 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 DEFB1P60022 68 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 TMEM241Q24JQ0 296 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 CENPWQ5EE01 88 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 PRR25Q96S07 402 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 DERL1Q9BUN8 251 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 TUBA4BQ9H853 241 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 BIN3Q9NQY0 253 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 LENEPQ9Y5L5 61 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 SORL1Q92673 2214 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 NOTCH3Q9UM47 2321 aa13.04□□□□□ -0.32
IGHV3-52-201ENST00000519770 KRBOX1C9JBD0 128 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 C9JCJ5 164 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 H3BMM0 161 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 CT45A10P0DMU9 189 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 GDF5OSQ5U4N7 250 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 Q86TA4 180 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 SMIM12Q96EX1 92 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 NAT8Q9UHE5 227 aa13.03□□□□□ -0.32
IGHV3-52-201ENST00000519770 TRBV7-9A0A0J9YWB2 115 aa13.02□□□□□ -0.33
IGHV3-52-201ENST00000519770 DEFB125Q8N687 156 aa13.02□□□□□ -0.33
IGHV3-52-201ENST00000519770 Q8TAT8 98 aa13.02□□□□□ -0.33
IGHV3-52-201ENST00000519770 ODF3Q96PU9 254 aa13.02□□□□□ -0.33
IGHV3-52-201ENST00000519770 SEC11CQ9BY50 192 aa13.02□□□□□ -0.33
IGHV3-52-201ENST00000519770 LTAP01374 205 aa13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 IGLV2-11P01706 119 aa13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 MGST1P10620 155 aaKnown RBP13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 ZNF124Q15973 351 aa13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 SMUG1Q53HV7 270 aa13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 CLUHP3Q96NS8 147 aa13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 SRD5A3Q9H8P0 318 aa13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 C19orf73Q9NVV2 129 aa13.01□□□□□ -0.33
IGHV3-52-201ENST00000519770 AMBPP02760 352 aa13□□□□□ -0.33
IGHV3-52-201ENST00000519770 GPX1P07203 203 aa13□□□□□ -0.33
IGHV3-52-201ENST00000519770 TMEM183AQ8IXX5 376 aa13□□□□□ -0.33
IGHV3-52-201ENST00000519770 LY96Q9Y6Y9 160 aa13□□□□□ -0.33
IGHV3-52-201ENST00000519770 KRTAP10-11P60412 298 aa12.99□□□□□ -0.33
IGHV3-52-201ENST00000519770 MORN3Q6PF18 240 aaPredicted RBP12.99□□□□□ -0.33
IGHV3-52-201ENST00000519770 TRPT1Q86TN4 253 aaKnown RBP12.99□□□□□ -0.33
IGHV3-52-201ENST00000519770 TVP23CQ96ET8 276 aa12.99□□□□□ -0.33
IGHV3-52-201ENST00000519770 IGF2BP2-AS1Q96M15 143 aa12.99□□□□□ -0.33
IGHV3-52-201ENST00000519770 WFDC10AQ9H1F0 79 aa12.99□□□□□ -0.33
IGHV3-52-201ENST00000519770 RPL35AP18077 110 aaKnown RBP12.98□□□□□ -0.33
IGHV3-52-201ENST00000519770 CDKN1BP46527 198 aa12.98□□□□□ -0.33
IGHV3-52-201ENST00000519770 PNRC1Q12796 327 aaPredicted RBP12.98□□□□□ -0.33
IGHV3-52-201ENST00000519770 NHLRC2Q8NBF2 726 aa12.98□□□□□ -0.33
IGHV3-52-201ENST00000519770 DAZAP1Q96EP5 407 aaKnown RBP12.98□□□□□ -0.33
IGHV3-52-201ENST00000519770 LOC102724200A0A096LPH7 203 aaPredicted RBP12.97□□□□□ -0.33
IGHV3-52-201ENST00000519770 J3KRW8 73 aa12.97□□□□□ -0.33
IGHV3-52-201ENST00000519770 ADIRFQ15847 76 aa12.97□□□□□ -0.33
IGHV3-52-201ENST00000519770 Q8N1Y9 231 aa12.97□□□□□ -0.33
IGHV3-52-201ENST00000519770 OCC1Q8TAD7 63 aa12.97□□□□□ -0.33
IGHV3-52-201ENST00000519770 ASCL2Q99929 193 aa12.97□□□□□ -0.33
IGHV3-52-201ENST00000519770 C1QTNF4Q9BXJ3 329 aa12.97□□□□□ -0.33
IGHV3-52-201ENST00000519770 A8MTW9 85 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 M0R036 132 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 CRISP2P16562 243 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 APOC4P55056 127 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 SPINK13Q1W4C9 94 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 PRR27Q6MZM9 219 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 C8orf49Q96NF6 230 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 SDF2L1Q9HCN8 221 aa12.96□□□□□ -0.33
IGHV3-52-201ENST00000519770 TRBV20OR9-2A0A075B6H5 130 aa12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 PGPEP1LA6NFU8 196 aa12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 GCGP01275 180 aa12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 APOC3P02656 99 aa12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 FXYD7P58549 80 aa12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 FAM162BQ5T6X4 162 aa12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 LINC01551Q86U37 167 aa12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 CARHSP1Q9Y2V2 147 aaKnown RBP12.95□□□□□ -0.34
IGHV3-52-201ENST00000519770 C7orf71A4D174 169 aa12.94□□□□□ -0.34
IGHV3-52-201ENST00000519770 FABP5P3A8MUU1 101 aa12.94□□□□□ -0.34
IGHV3-52-201ENST00000519770 M0R2Z0 102 aa12.94□□□□□ -0.34
IGHV3-52-201ENST00000519770 IGHV4-30-4P0DP06 118 aa12.94□□□□□ -0.34
IGHV3-52-201ENST00000519770 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
IGHV3-52-201ENST00000519770 KPRPQ5T749 579 aaPredicted RBP12.94□□□□□ -0.34
IGHV3-52-201ENST00000519770 AMTNQ6UX39 209 aa12.94□□□□□ -0.34
IGHV3-52-201ENST00000519770 SVBPQ8N300 66 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms