RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 SSX7Q7RTT5 188 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 TMEM256Q8N2U0 113 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 ZFAND2AQ8N6M9 145 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 OR10G4Q8NGN3 311 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 OR10G9Q8NGN4 311 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 OR10G7Q8NGN6 311 aa9.42□□□□□ -0.9
VEGFA-219ENST00000518824 RNASE8Q8TDE3 154 aaKnown RBP9.42□□□□□ -0.9
VEGFA-219ENST00000518824 KLLNB2CW77 178 aa9.41□□□□□ -0.9
VEGFA-219ENST00000518824 H7BYZ3 331 aa9.41□□□□□ -0.9
VEGFA-219ENST00000518824 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
VEGFA-219ENST00000518824 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
VEGFA-219ENST00000518824 LEPP41159 167 aa9.41□□□□□ -0.9
VEGFA-219ENST00000518824 ZNF266Q14584 549 aa9.41□□□□□ -0.9
VEGFA-219ENST00000518824 LINC00477Q96M19 166 aa9.41□□□□□ -0.9
VEGFA-219ENST00000518824 C7orf71A4D174 169 aa9.4□□□□□ -0.9
VEGFA-219ENST00000518824 ZNF324O75467 553 aaPredicted RBP9.4□□□□□ -0.9
VEGFA-219ENST00000518824 ARL14EPLP0DKL9 152 aa9.4□□□□□ -0.9
VEGFA-219ENST00000518824 RNASE4P34096 147 aaKnown RBP9.4□□□□□ -0.9
VEGFA-219ENST00000518824 TAS2R45P59539 299 aa9.4□□□□□ -0.9
VEGFA-219ENST00000518824 OR2G3Q8NGZ4 309 aa9.4□□□□□ -0.9
VEGFA-219ENST00000518824 ASB13Q8WXK3 278 aa9.4□□□□□ -0.9
VEGFA-219ENST00000518824 HYLS1Q96M11 299 aa9.4□□□□□ -0.9
VEGFA-219ENST00000518824 PSMG3Q9BT73 122 aaPredicted RBP9.4□□□□□ -0.9
VEGFA-219ENST00000518824 NOP10Q9NPE3 64 aaKnown RBP9.4□□□□□ -0.9
VEGFA-219ENST00000518824 ZNF492Q9P255 531 aa9.4□□□□□ -0.9
VEGFA-219ENST00000518824 A0A1W2PPV4 95 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 PGPA6NDG6 321 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 LYRM9A8MSI8 78 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 DIRC3C9JPN6 131 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 ARPC5O15511 151 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 SLC25A5P05141 298 aaKnown RBP9.39□□□□□ -0.91
VEGFA-219ENST00000518824 CRISP2P16562 243 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 CDC34P49427 236 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-219ENST00000518824 GNG5P63218 68 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 INO80EQ8NBZ0 244 aaPredicted RBP9.39□□□□□ -0.91
VEGFA-219ENST00000518824 OR11H4Q8NGC9 324 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 TMEM263Q8WUH6 116 aaKnown RBP9.39□□□□□ -0.91
VEGFA-219ENST00000518824 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 C16orf74Q96GX8 76 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 C20orf144Q9BQM9 153 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 CYTL1Q9NRR1 136 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 RPH3ALQ9UNE2 315 aa9.39□□□□□ -0.91
VEGFA-219ENST00000518824 TEX48A0A1B0GUV7 120 aa9.38□□□□□ -0.91
VEGFA-219ENST00000518824 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
VEGFA-219ENST00000518824 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
VEGFA-219ENST00000518824 TCTAP57738 103 aa9.38□□□□□ -0.91
VEGFA-219ENST00000518824 ZNF726P1Q15940 193 aa9.38□□□□□ -0.91
VEGFA-219ENST00000518824 TMEM88Q6PEY1 159 aa9.38□□□□□ -0.91
VEGFA-219ENST00000518824 TP53TG3Q9ULZ0 132 aa9.38□□□□□ -0.91
VEGFA-219ENST00000518824 TIMM8BQ9Y5J9 83 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-219ENST00000518824 GPX1P07203 203 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 ZNF138P52744 262 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 TMEM78Q5T7P6 136 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 PQLC2Q6ZP29 291 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 LYPD1Q8N2G4 141 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 C11orf72Q8NBR9 251 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 TVP23CQ96ET8 276 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 NDUFAF3Q9BU61 184 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
VEGFA-219ENST00000518824 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 GCHFRP30047 84 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 CSN1S1P47710 185 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 SERF2P84101 59 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 SGK494Q96LW2 274 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 PYGO2Q9BRQ0 406 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 GSN-AS1Q9NRJ2 163 aa9.36□□□□□ -0.91
VEGFA-219ENST00000518824 DNAH6Q9C0G6 4158 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 F5H768 121 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 GAGE7O76087 117 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 Q6ZTI0 123 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 GOLT1AQ6ZVE7 132 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 CCDC28AQ8IWP9 274 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 KLF12Q9Y4X4 402 aa9.35□□□□□ -0.91
VEGFA-219ENST00000518824 BORCS7-ASMTA0A0B4J1R7 106 aa9.34□□□□□ -0.91
VEGFA-219ENST00000518824 CBY3A6NI87 242 aa9.34□□□□□ -0.91
VEGFA-219ENST00000518824 MUC21Q5SSG8 566 aa9.34□□□□□ -0.91
VEGFA-219ENST00000518824 EIF4E3Q8N5X7 224 aaKnown RBP9.34□□□□□ -0.91
VEGFA-219ENST00000518824 ACTR3CQ9C0K3 210 aaPredicted RBP9.34□□□□□ -0.91
VEGFA-219ENST00000518824 NACAE9PAV3 2078 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 GGTLC3B5MD39 225 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 F6UZH7 168 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 MBP02144 154 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 NMBP08949 121 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 HOXA5P20719 270 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 FGF8P55075 233 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-219ENST00000518824 KCNRGQ8N5I3 272 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 CMTM2Q8TAZ6 248 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 RXFP4Q8TDU9 374 aa9.33□□□□□ -0.92
VEGFA-219ENST00000518824 GNPNAT1Q96EK6 184 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-219ENST00000518824 LINC00467Q9BRT7 94 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms