RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 GGTLC3B5MD39 225 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 K7EQM0 130 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 UBE2CO00762 179 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 PRB4P10163 310 aaPredicted RBP9.55□□□□□ -0.88
PABPC1-205ENST00000518196 PMS2P11Q13670 270 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 LINC00477Q96M19 166 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 CDIP1Q9H305 208 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 EPDR1Q9UM22 224 aa9.55□□□□□ -0.88
PABPC1-205ENST00000518196 IGKV2-40A0A087WW87 121 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-205ENST00000518196 A8MTW9 85 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 NPIPB6E9PJ23 425 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 F6UZH7 168 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 IGKV2D-40P01614 121 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-205ENST00000518196 TAGLN2P37802 199 aaKnown RBP9.54□□□□□ -0.88
PABPC1-205ENST00000518196 RAB14P61106 215 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 HAGHQ16775 308 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 TMEM78Q5T7P6 136 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 C9orf47Q6ZRZ4 202 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 ZNF767PQ75MW2 155 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 LYPD6BQ8NI32 183 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 TXNDC17Q9BRA2 123 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 TCEAL7Q9BRU2 100 aa9.54□□□□□ -0.88
PABPC1-205ENST00000518196 C11orf94C9JXX5 98 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-205ENST00000518196 AMBPP02760 352 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 TCRAP04437 139 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 GNG5P63218 68 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 ERCC8Q13216 396 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 GOLT1AQ6ZVE7 132 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 HIST1H2BAQ96A08 127 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 B9D2Q9BPU9 175 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 C1QTNF4Q9BXJ3 329 aa9.53□□□□□ -0.88
PABPC1-205ENST00000518196 TSPOP30536 169 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 ATP5G3P48201 142 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 FXYD7P58549 80 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 CCDC28AQ8IWP9 274 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 CYB561D1Q8N8Q1 229 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 ODF3Q96PU9 254 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 ASCL2Q99929 193 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 VGLL1Q99990 258 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 ATG101Q9BSB4 218 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 X6R8D5 127 aa9.52□□□□□ -0.89
PABPC1-205ENST00000518196 FBLL1A6NHQ2 334 aaKnown RBP9.51□□□□□ -0.89
PABPC1-205ENST00000518196 PEX7O00628 323 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 CT45A10P0DMU9 189 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 BCL2P10415 239 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 LEPP41159 167 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 ZNF138P52744 262 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 AMTNQ6UX39 209 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 PCNPQ8WW12 178 aaKnown RBP9.51□□□□□ -0.89
PABPC1-205ENST00000518196 SLC35B3Q9H1N7 401 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 ZNF492Q9P255 531 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 VAX2Q9UIW0 290 aa9.51□□□□□ -0.89
PABPC1-205ENST00000518196 RBFOX3A6NFN3 312 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 NMBP08949 121 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 CDKN1BP46527 198 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 IFITM2Q01629 132 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 SPINK13Q1W4C9 94 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 Q6ZWC4 215 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 TMEM75Q8N9X5 138 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 ZMAT4Q9H898 229 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 XCL2Q9UBD3 114 aa9.5□□□□□ -0.89
PABPC1-205ENST00000518196 TRBV7-9A0A0J9YWB2 115 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 LOC102723971A0A1B0GUV8 181 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 M0R2Z0 102 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 PDE6DO43924 150 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 NHLRC4P0CG21 123 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-205ENST00000518196 AKR1C3P42330 323 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 UBE2G1P62253 170 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 FLI1Q01543 452 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-205ENST00000518196 MEF2BQ02080 365 aaPredicted RBP9.49□□□□□ -0.89
PABPC1-205ENST00000518196 RCHY1Q96PM5 261 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 SPATA25Q9BR10 227 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 NDFIP1Q9BT67 221 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 LENEPQ9Y5L5 61 aa9.49□□□□□ -0.89
PABPC1-205ENST00000518196 TRAV8-1A0A0A6YYK1 113 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 SPRY2O43597 315 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 INSP01308 110 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 S100A9P06702 114 aaKnown RBP9.48□□□□□ -0.89
PABPC1-205ENST00000518196 GIG44P09565 113 aaPredicted RBP9.48□□□□□ -0.89
PABPC1-205ENST00000518196 DEFB135Q30KP9 77 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 ZNF506Q5JVG8 444 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 IGF2BP2-AS1Q96M15 143 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 RARRES2Q99969 163 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 EIF5A2Q9GZV4 153 aaKnown RBP9.48□□□□□ -0.89
PABPC1-205ENST00000518196 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 TP53TG1Q9Y2A0 90 aa9.48□□□□□ -0.89
PABPC1-205ENST00000518196 TRAV34A0A0B4J273 112 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 J3KRW8 73 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 GPX1P07203 203 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 CRISP2P16562 243 aa9.47□□□□□ -0.89
PABPC1-205ENST00000518196 TOR2AQ5JU69 321 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms