RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ATP5G1P05496 136 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 CT45A10P0DMU9 189 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 ATP5G3P48201 142 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 PDE6HQ13956 83 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 KIR3DS1Q14943 382 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 LGALS9BQ3B8N2 356 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 LRRC37A5PQ49AS3 106 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 GCSAMLQ5JQS6 135 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 GFI1BQ5VTD9 330 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 CCDC28AQ8IWP9 274 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 THAP6Q8TBB0 222 aa7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 PARD6GQ9BYG4 376 aaPredicted RBP7.45□□□□□ -1.22
PDGFRB-203ENST00000517660 F5H768 121 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 M0R2N4 97 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 NDUFB4O95168 129 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 PYYP10082 97 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 CLINT1Q14677 625 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 Q5BKY6 102 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 OR11H4Q8NGC9 324 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 RNASE8Q8TDE3 154 aaKnown RBP7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 TMEM263Q8WUH6 116 aaKnown RBP7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 LINC00477Q96M19 166 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 WDR61Q9GZS3 305 aaKnown RBP7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 NOP10Q9NPE3 64 aaKnown RBP7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 KCNIP2Q9NS61 270 aa7.44□□□□□ -1.22
PDGFRB-203ENST00000517660 FXYD6-FXYD2A0A087WZ82 144 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 C17orf112F2Z3M2 114 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 J3KRW8 73 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 M0R3E3 92 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 H2BFSP57053 126 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 FAM3BP58499 235 aaPredicted RBP7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 MIR17HGQ75NE6 70 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 BLNKQ8WV28 456 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 PPP1R1CQ8WVI7 109 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 FAM167A-AS1Q96KT0 104 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 FAM210AQ96ND0 272 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 SLC25A2Q9BXI2 301 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 AAMDCQ9H7C9 122 aa7.43□□□□□ -1.22
PDGFRB-203ENST00000517660 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 IGLV2-18A0A075B6J9 118 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 TRAV12-3A0A0B4J271 114 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 G3V3Q6 166 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 MPC2O95563 127 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 SLC25A5P05141 298 aaKnown RBP7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 NBEAP1P0C6P0 100 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 PET100P0DJ07 73 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 ERCC8Q13216 396 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 Q8N1X5 172 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 EXOC3-AS1Q8N2X6 119 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 ATP5SQ99766 215 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 PYGO2Q9BRQ0 406 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 MRPL32Q9BYC8 188 aaKnown RBP7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 AGPAT4-IT1Q9H0P7 198 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 OR51M1Q9H341 326 aa7.42□□□□□ -1.22
PDGFRB-203ENST00000517660 FAT1Q14517 4588 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 C7orf71A4D174 169 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 ARPC5O15511 151 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 CDK2AP2O75956 126 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 NUDT3O95989 172 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 IFNA5P01569 189 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 RPL12P30050 165 aaKnown RBP7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 ICAM4Q14773 271 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 LGALSLQ3ZCW2 172 aaPredicted RBP7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 Q6ZR54 194 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 C9orf47Q6ZRZ4 202 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 LINC00612Q8N6U2 182 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 SCGB1C1Q8TD33 95 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 RNF141Q8WVD5 230 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 FAM19A4Q96LR4 140 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 ATG101Q9BSB4 218 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 PAXXQ9BUH6 204 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 FUT9Q9Y231 359 aa7.41□□□□□ -1.22
PDGFRB-203ENST00000517660 HMSDA8MTL9 139 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 SNURFLB1AK76 121 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 KLLNB2CW77 178 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 ZNF324O75467 553 aaPredicted RBP7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 IFNA7P01567 189 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 NMBP08949 121 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 RNASE4P34096 147 aaKnown RBP7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 DAZ2Q13117 558 aaKnown RBP7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 TMEM78Q5T7P6 136 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 FAM122CQ6P4D5 195 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 SLC7A5P1Q8MH63 180 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 FXYD5Q96DB9 178 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 LINC00467Q9BRT7 94 aa7.4□□□□□ -1.22
PDGFRB-203ENST00000517660 GAGE12BA1L429 117 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 GAGE7O76087 117 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 GPX1P07203 203 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 OR10J4P0C629 311 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 GAGE12FP0CL80 117 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 GAGE12GP0CL81 117 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 GAGE12IP0CL82 117 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 CRISP2P16562 243 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 S100A1P23297 94 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 CCL18P55774 89 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 OR5I1Q13606 314 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 ANXA2RQ3ZCQ2 193 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 SOHLH1Q5JUK2 328 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 FFAR4Q5NUL3 377 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 TMUB2Q71RG4 321 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms