RNA–Protein interactions for RNA: ENST00000516052.1

SCARNA20.2-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 116 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.2-201ENST00000516052 TCRBP04435 133 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SERPINE2P07093 398 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 HIST1H2AGP0C0S8 130 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 OR10J4P0C629 311 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SPP1P10451 314 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SLC25A4P12235 298 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 RPL7P18124 248 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 IL11P20809 199 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CALB2P22676 271 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 PRDX6P30041 224 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CSKP41240 450 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 ATP5OP48047 213 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 DNASE1L1P49184 302 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 PSMB3P49720 205 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 RGS4P49798 205 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 FABP6P51161 128 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 DAPP51397 102 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CCNHP51946 323 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 ATXN3P54252 364 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 NAPAP54920 295 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SNU13P55769 128 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CCL18P55774 89 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 TCL1AP56279 114 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 PIGPP57054 158 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 TMEM33P57088 247 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 POLR2FP61218 127 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 LCN6P62502 163 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 RPL30P62888 115 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 RPL10AP62906 217 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 BLCAPP62952 87 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SUMO1P63165 101 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 RGS1Q08116 209 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 COTL1Q14019 142 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 COX17Q14061 63 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SYCP1Q15431 976 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SPHARQ15513 63 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 OR8B8Q15620 311 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 RHOHQ15669 191 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 PSMD5Q16401 504 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 MAPK14Q16539 360 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 HADHQ16836 314 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 TMEM41BQ5BJD5 291 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 FBXO48Q5FWF7 155 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 UBE2NLQ5JXB2 153 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 C6orf183Q5T699 404 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 C1orf185Q5T7R7 199 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SYPL2Q5VXT5 272 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 NCBP2-AS2Q69YL0 99 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SHQ1Q6PI26 577 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CASC1Q6TDU7 716 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SLC25A26Q70HW3 274 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 GPR141Q7Z602 305 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 COMMD7Q86VX2 200 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 BPIFA4PQ86YQ2 179 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 MUSTN1Q8IVN3 82 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 FNDC5Q8NAU1 212 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CLRN3Q8NCR9 226 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 OR5AK3PQ8NH89 298 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 GRK7Q8WTQ7 553 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 FAM172AQ8WUF8 416 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 TMEM263Q8WUH6 116 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 DNAJB3Q8WWF6 145 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 ANKRD7Q92527 254 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 IFI27L1Q96BM0 104 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CDK5RAP3Q96JB5 506 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 LINC01587Q99440 93 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 COPS8Q99627 209 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 MGST2Q99735 147 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SLC29A1Q99808 456 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SSX3Q99909 188 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 VPS25Q9BRG1 176 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 GINS3Q9BRX5 216 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 ANAPC13Q9BS18 74 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 NACAP1Q9BZK3 213 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SLC7A5P2Q9GIP4 190 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SLC22A4Q9H015 551 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CST11Q9H112 138 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 C11orf68Q9H3H3 251 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 BCL2L10Q9HD36 194 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CHMP1AQ9HD42 196 aaPredicted RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 ACOT13Q9NPJ3 140 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 RGS18Q9NS28 235 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 IFT57Q9NWB7 429 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 COPZ2Q9P299 210 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 GALPQ9UBC7 116 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 EXTL2Q9UBQ6 330 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SLC24A2Q9UI40 661 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 DAPP1Q9UN19 280 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 B9D1Q9UPM9 204 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 OR51B2Q9Y5P1 312 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 SERP1Q9Y6X1 66 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 FOCADQ5VW36 1801 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CFAP43Q8NDM7 1665 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 FAM208AQ9UK61 1670 aaKnown RBP-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 NEXMIFQ5QGS0 1516 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 TCHHQ07283 1943 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 ABCC11Q96J66 1382 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CCDC180Q9P1Z9 1646 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 MAP3K4Q9Y6R4 1608 aa-1.11□□□□□ -2.59
SCARNA20.2-201ENST00000516052 CCDC171Q6TFL3 1326 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms