RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 VGLL1Q99990 258 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 RNF114Q9Y508 228 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 CRIP1P50238 77 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 OR4B1Q8NGF8 309 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 C8orf49Q96NF6 230 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 MT-ND6P03923 174 aa11.8□□□□□ -0.52
THUMPD3-210ENST00000515662 CRISP2P16562 243 aa11.8□□□□□ -0.52
THUMPD3-210ENST00000515662 TCF24Q7RTU0 167 aa11.8□□□□□ -0.52
THUMPD3-210ENST00000515662 GTSF1Q8WW33 167 aa11.8□□□□□ -0.52
THUMPD3-210ENST00000515662 DUX5Q96PT3 197 aa11.8□□□□□ -0.52
THUMPD3-210ENST00000515662 C2orf88Q9BSF0 95 aa11.8□□□□□ -0.52
THUMPD3-210ENST00000515662 PRAC2D3DTV9 90 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 SAPCD1Q5SSQ6 148 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 WIPF2Q8TF74 440 aaPredicted RBP11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 GFRA4Q9GZZ7 299 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 RPLP1P05386 114 aaKnown RBP11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 FOXE3Q13461 319 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 RASL11AQ6T310 242 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 OR2D3Q8NGH3 330 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 PRR25Q96S07 402 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 SNHG12Q9BXW3 62 aa11.79□□□□□ -0.52
THUMPD3-210ENST00000515662 KRTAP1-1Q07627 177 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 PRR31Q5SQ13 230 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 Q8N2B8 174 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 Q8TAT8 98 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 MRPL53Q96EL3 112 aaKnown RBP11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 A0A1W2PS18 150 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 FAM231BA6NCW3 169 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 ELANEP08246 267 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 CT45A10P0DMU9 189 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 BAGE3Q86Y29 109 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 MYOZ3Q8TDC0 251 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 UNC79Q9P2D8 2635 aa11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 GCN1Q92616 2671 aaKnown RBP11.78□□□□□ -0.52
THUMPD3-210ENST00000515662 IGHV7-4-1A0A0J9YVY3 117 aa11.77□□□□□ -0.52
THUMPD3-210ENST00000515662 RBAKDNA6NC62 111 aa11.77□□□□□ -0.52
THUMPD3-210ENST00000515662 HLA-DQA1P01909 254 aa11.77□□□□□ -0.52
THUMPD3-210ENST00000515662 ATP5L2Q7Z4Y8 100 aa11.77□□□□□ -0.52
THUMPD3-210ENST00000515662 GPHB5Q86YW7 130 aa11.77□□□□□ -0.52
THUMPD3-210ENST00000515662 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.52
THUMPD3-210ENST00000515662 ERCC8Q13216 396 aa11.77□□□□□ -0.53
THUMPD3-210ENST00000515662 FAM106AQ4KMX7 169 aa11.77□□□□□ -0.53
THUMPD3-210ENST00000515662 GDF5OSQ5U4N7 250 aa11.77□□□□□ -0.53
THUMPD3-210ENST00000515662 TMEM86BQ8N661 226 aa11.77□□□□□ -0.53
THUMPD3-210ENST00000515662 FLNAP21333 2647 aaKnown RBP11.77□□□□□ -0.53
THUMPD3-210ENST00000515662 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 A0A1B0GXF2 115 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 K7EMT4 169 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 RBPMS2Q6ZRY4 209 aaKnown RBP11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 RNF152Q8N8N0 203 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 C16orf92Q96LL3 132 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 RCHY1Q96PM5 261 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 CCDC168Q8NDH2 2452 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 KIR2DL5BA0A0G2JN68 375 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 KIR2DL5BA0A0G2JPC4 375 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 CD5LO43866 347 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 FAM162BQ5T6X4 162 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 KIR2DL5AQ8N109 375 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 RHPN1-AS1Q9BWJ2 59 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 CLEC5AQ9NY25 188 aa11.76□□□□□ -0.53
THUMPD3-210ENST00000515662 SH2D1AO60880 128 aa11.75□□□□□ -0.53
THUMPD3-210ENST00000515662 SAMD10Q9BYL1 202 aa11.75□□□□□ -0.53
THUMPD3-210ENST00000515662 SMPXQ9UHP9 88 aa11.75□□□□□ -0.53
THUMPD3-210ENST00000515662 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
THUMPD3-210ENST00000515662 LGALS1P09382 135 aaKnown RBP11.75□□□□□ -0.53
THUMPD3-210ENST00000515662 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
THUMPD3-210ENST00000515662 SOCS3O14543 225 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 APCSP02743 223 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 C20orf173Q96LM9 149 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 UBE2E2Q96LR5 201 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 NDFIP1Q9BT67 221 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 EDN2P20800 178 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 CAMPP49913 170 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 ZNF80P51504 273 aaPredicted RBP11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 SSTP61278 116 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 SLAQ13239 276 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 ZNF705AQ6ZN79 300 aaPredicted RBP11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 AGPAT4-IT1Q9H0P7 198 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 YAE1D1Q9NRH1 226 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 UFC1Q9Y3C8 167 aa11.74□□□□□ -0.53
THUMPD3-210ENST00000515662 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
THUMPD3-210ENST00000515662 HBBP68871 147 aa11.73□□□□□ -0.53
THUMPD3-210ENST00000515662 NRN1Q9NPD7 142 aa11.73□□□□□ -0.53
THUMPD3-210ENST00000515662 DNAJC9-AS1A6NH13 148 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 G0S2P27469 103 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 RPL11P62913 178 aaKnown RBP11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 TCAPO15273 167 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 PMCHP20382 165 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 SRIP30626 198 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 KRTDAPP60985 99 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 Q0VG73 95 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 C9orf47Q6ZRZ4 202 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 TLN2Q9Y4G6 2542 aa11.72□□□□□ -0.53
THUMPD3-210ENST00000515662 TMEM189A5PLL7 270 aa11.71□□□□□ -0.53
THUMPD3-210ENST00000515662 FAM181BA6NEQ2 426 aa11.71□□□□□ -0.53
THUMPD3-210ENST00000515662 ESDP10768 282 aa11.71□□□□□ -0.53
THUMPD3-210ENST00000515662 BMI1P35226 326 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms