RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 H3BQ15 152 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 OR4E1P0C645 316 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 AKAIN1P0CW23 69 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 IGLC2P0DOY2 106 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 TNFSF8P32971 234 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 VBP1P61758 197 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 RRAS2P62070 204 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-231ENST00000515620 SLC38A11Q08AI6 406 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 MORN5Q5VZ52 161 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 CLVS1Q8IUQ0 354 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-231ENST00000515620 IQCF2Q8IXL9 164 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 NHLRC2Q8NBF2 726 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 OR10P1Q8NGE3 313 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 SAT2Q96F10 170 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-231ENST00000515620 TM2D2Q9BX73 214 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 Q9H521 79 aa6.9□□□□□ -1.3
CLDND1-231ENST00000515620 IGHV1OR15-1A0A075B7D0 117 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 DUXBA0A1W2PPF3 345 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 GPX1P07203 203 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
CLDND1-231ENST00000515620 ZNF846Q147U1 533 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 OPCMLQ14982 345 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 ACOT6Q3I5F7 207 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-231ENST00000515620 OR10J3Q5JRS4 329 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 PRR9Q5T870 116 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 Q6ZQT7 251 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 OR10G4Q8NGN3 311 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 C15orf40Q8WUR7 153 aa6.89□□□□□ -1.31
CLDND1-231ENST00000515620 DAZAP1Q96EP5 407 aaKnown RBP6.89□□□□□ -1.31
CLDND1-231ENST00000515620 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 K7EPK0 472 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 M0R3E3 92 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 COX7A2P2O60397 106 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 SLC25A6P12236 298 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 TIRAPP58753 221 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 ASAH1Q13510 395 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 LAGE3Q14657 143 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 PXDC1Q5TGL8 231 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 C9orf47Q6ZRZ4 202 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 SH2D6Q7Z4S9 175 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 TMEM37Q8WXS4 190 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 FAM19A4Q96LR4 140 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 SCGB3A2Q96PL1 93 aa6.88□□□□□ -1.31
CLDND1-231ENST00000515620 PIGBOS1A0A0B4J2F0 54 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 GOSR2O14653 212 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 TDRG1Q3Y452 100 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 ZNF546Q86UE3 836 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 ZFAND2AQ8N6M9 145 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 SMIM4Q8WVI0 70 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 BAALCQ8WXS3 180 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 AP3S1Q92572 193 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 AGPAT4-IT1Q9H0P7 198 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 SCP2D1Q9UJQ7 156 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 RABL2BQ9UNT1 228 aa6.87□□□□□ -1.31
CLDND1-231ENST00000515620 AGPAT2O15120 278 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 CRISP2P16562 243 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 MRPS10P82664 201 aaKnown RBP6.86□□□□□ -1.31
CLDND1-231ENST00000515620 GUK1Q16774 197 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 C10orf113Q5VZT2 155 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 Q8N3U1 123 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 SRRQ9GZT4 340 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 MCUBQ9NWR8 336 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 PSENENQ9NZ42 101 aa6.86□□□□□ -1.31
CLDND1-231ENST00000515620 CCDC59Q9P031 241 aaKnown RBP6.86□□□□□ -1.31
CLDND1-231ENST00000515620 IGKV2-40A0A087WW87 121 aaPredicted RBP6.85□□□□□ -1.31
CLDND1-231ENST00000515620 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 IGKV2D-40P01614 121 aaPredicted RBP6.85□□□□□ -1.31
CLDND1-231ENST00000515620 IGLV2-11P01706 119 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 C4orf46Q504U0 113 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 MRPL53Q96EL3 112 aaKnown RBP6.85□□□□□ -1.31
CLDND1-231ENST00000515620 FUNDC2Q9BWH2 189 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 NPVFQ9HCQ7 196 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 VCX3AQ9NNX9 186 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 MGAT4CQ9UBM8 478 aa6.85□□□□□ -1.31
CLDND1-231ENST00000515620 IGHV3-16A0A0C4DH30 117 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 ANKRD20A5PA0PJZ0 165 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 SSSCA1O60232 199 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 ZNF253O75346 499 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 HOXB5P09067 269 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 METTL15P1P0C7V9 234 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 POLR2GP62487 172 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLDND1-231ENST00000515620 OR4C5Q8NGB2 326 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 RAB2BQ8WUD1 216 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 RASL10AQ92737 203 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 MIXL1Q9H2W2 232 aa6.84□□□□□ -1.31
CLDND1-231ENST00000515620 TRBV19A0A075B6N1 114 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 FNDC10F2Z333 226 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 RGS5O15539 181 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 PFN1P07737 140 aaKnown RBP6.83□□□□□ -1.32
CLDND1-231ENST00000515620 NMBP08949 121 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 TMEM183BQ1AE95 376 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 TMEM128Q5BJH2 165 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 TMEM78Q5T7P6 136 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 LELP1Q5T871 98 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 TMEM183AQ8IXX5 376 aa6.83□□□□□ -1.32
CLDND1-231ENST00000515620 Q8N976 141 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms