RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 K7EQG2 157 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
NUP54-214ENST00000514307 IGKV2D-40P01614 121 aaPredicted RBP12.06□□□□□ -0.48
NUP54-214ENST00000514307 PF4P02776 101 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 ZNF138P52744 262 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 KRTAP10-3P60369 221 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 RPL19P84098 196 aaKnown RBP12.06□□□□□ -0.48
NUP54-214ENST00000514307 OR5I1Q13606 314 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 IBA57Q5T440 356 aaKnown RBP12.06□□□□□ -0.48
NUP54-214ENST00000514307 ADAMTSL5Q6ZMM2 481 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 CBLN2Q8IUK8 224 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 PRR25Q96S07 402 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 ZNF492Q9P255 531 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 LENEPQ9Y5L5 61 aa12.06□□□□□ -0.48
NUP54-214ENST00000514307 NIPBLQ6KC79 2804 aaeCLIP12.06□□□□□ -0.48
NUP54-214ENST00000514307 EDN2P20800 178 aa12.05□□□□□ -0.48
NUP54-214ENST00000514307 TFPI2P48307 235 aa12.05□□□□□ -0.48
NUP54-214ENST00000514307 COX8CQ7Z4L0 72 aa12.05□□□□□ -0.48
NUP54-214ENST00000514307 NHLRC2Q8NBF2 726 aa12.05□□□□□ -0.48
NUP54-214ENST00000514307 VGLL1Q99990 258 aa12.05□□□□□ -0.48
NUP54-214ENST00000514307 AGPAT4-IT1Q9H0P7 198 aa12.05□□□□□ -0.48
NUP54-214ENST00000514307 OR4C46A6NHA9 309 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 PRAC2D3DTV9 90 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 SMUG1Q53HV7 270 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 HIST2H2BDQ6DRA6 164 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 EBLN2Q6P2I7 272 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 NUDT10Q8NFP7 164 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 OR2K2Q8NGT1 345 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 NUDT11Q96G61 164 aa12.04□□□□□ -0.48
NUP54-214ENST00000514307 SPAG8Q99932 426 aaPredicted RBP12.04□□□□□ -0.48
NUP54-214ENST00000514307 TRBV7-9A0A0J9YWB2 115 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 ZNF705GA8MUZ8 300 aaPredicted RBP12.03□□□□□ -0.48
NUP54-214ENST00000514307 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
NUP54-214ENST00000514307 P01737 135 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 ERCC8Q13216 396 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 PRR27Q6MZM9 219 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 FAM24BQ8N5W8 94 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.03□□□□□ -0.48
NUP54-214ENST00000514307 OR4B1Q8NGF8 309 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 OR8A1Q8NGG7 326 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 C20orf173Q96LM9 149 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 CITED1Q99966 193 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 IL36BQ9NZH7 164 aa12.03□□□□□ -0.48
NUP54-214ENST00000514307 JMJD1CQ15652 2540 aa12.02□□□□□ -0.48
NUP54-214ENST00000514307 TRAV9-1A0A075B6T8 112 aa12.02□□□□□ -0.49
NUP54-214ENST00000514307 COLCA2A8K830 154 aa12.02□□□□□ -0.49
NUP54-214ENST00000514307 FABP5P3A8MUU1 101 aa12.02□□□□□ -0.49
NUP54-214ENST00000514307 A8MWL6 223 aa12.02□□□□□ -0.49
NUP54-214ENST00000514307 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.49
NUP54-214ENST00000514307 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.49
NUP54-214ENST00000514307 ASCL2Q99929 193 aa12.02□□□□□ -0.49
NUP54-214ENST00000514307 RNASE7Q9H1E1 156 aaKnown RBP12.02□□□□□ -0.49
NUP54-214ENST00000514307 SAP30O75446 220 aa12.01□□□□□ -0.49
NUP54-214ENST00000514307 CD300EQ496F6 205 aaPredicted RBP12.01□□□□□ -0.49
NUP54-214ENST00000514307 PSMG4Q5JS54 123 aa12.01□□□□□ -0.49
NUP54-214ENST00000514307 FAM162BQ5T6X4 162 aa12.01□□□□□ -0.49
NUP54-214ENST00000514307 PRIMA1Q86XR5 153 aa12.01□□□□□ -0.49
NUP54-214ENST00000514307 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
NUP54-214ENST00000514307 SELENOKQ9Y6D0 94 aa12.01□□□□□ -0.49
NUP54-214ENST00000514307 V9GYV3 84 aa12.01□□□□□ -0.49
NUP54-214ENST00000514307 TRBV24-1A0A075B6N3 115 aa12□□□□□ -0.49
NUP54-214ENST00000514307 XKRY2A2RUG3 117 aa12□□□□□ -0.49
NUP54-214ENST00000514307 C19orf71A6NCJ1 209 aa12□□□□□ -0.49
NUP54-214ENST00000514307 ZNF688P0C7X2 276 aa12□□□□□ -0.49
NUP54-214ENST00000514307 INSL3P51460 131 aa12□□□□□ -0.49
NUP54-214ENST00000514307 HIST1H1AQ02539 215 aaPredicted RBP12□□□□□ -0.49
NUP54-214ENST00000514307 ELOBQ15370 118 aa12□□□□□ -0.49
NUP54-214ENST00000514307 CT83Q5H943 113 aa12□□□□□ -0.49
NUP54-214ENST00000514307 ZC2HC1AQ96GY0 325 aa12□□□□□ -0.49
NUP54-214ENST00000514307 RPP21Q9H633 154 aaKnown RBP12□□□□□ -0.49
NUP54-214ENST00000514307 URGCP-MRPS24S4R325 110 aa12□□□□□ -0.49
NUP54-214ENST00000514307 CUBNO60494 3623 aa11.99□□□□□ -0.49
NUP54-214ENST00000514307 RPS20P60866 119 aaKnown RBP11.99□□□□□ -0.49
NUP54-214ENST00000514307 FOXI2Q6ZQN5 318 aa11.99□□□□□ -0.49
NUP54-214ENST00000514307 TMEM158Q8WZ71 300 aa11.99□□□□□ -0.49
NUP54-214ENST00000514307 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
NUP54-214ENST00000514307 FAM231BA6NCW3 169 aa11.98□□□□□ -0.49
NUP54-214ENST00000514307 TSPOP30536 169 aa11.98□□□□□ -0.49
NUP54-214ENST00000514307 LINC00482Q8N8I6 264 aa11.98□□□□□ -0.49
NUP54-214ENST00000514307 TSKUQ8WUA8 353 aa11.98□□□□□ -0.49
NUP54-214ENST00000514307 FAM210BQ96KR6 192 aa11.98□□□□□ -0.49
NUP54-214ENST00000514307 C8orf49Q96NF6 230 aa11.98□□□□□ -0.49
NUP54-214ENST00000514307 PYGO2Q9BRQ0 406 aa11.98□□□□□ -0.49
NUP54-214ENST00000514307 MCRIP2Q9BUT9 160 aaKnown RBP11.98□□□□□ -0.49
NUP54-214ENST00000514307 A0A0J9YX75 114 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 SMIM27A0A1W2PRY6 76 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 TMEM189A5PLL7 270 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 IGLV1-51P01701 117 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 RAB5AP20339 215 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 LEPP41159 167 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 FAM3BP58499 235 aaPredicted RBP11.97□□□□□ -0.49
NUP54-214ENST00000514307 C3orf56Q8N813 242 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 OR2D3Q8NGH3 330 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 Q8TAT8 98 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 YPEL4Q96NS1 127 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 ODF3Q96PU9 254 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
NUP54-214ENST00000514307 SAV1Q9H4B6 383 aaPredicted RBP11.97□□□□□ -0.49
NUP54-214ENST00000514307 GPX1P07203 203 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms