RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 RAB32Q13637 225 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 TTC32Q5I0X7 151 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 SPATA12Q7Z6I5 190 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 TMEM252Q8N6L7 170 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 MAPKAPK5-AS1Q8N8E1 139 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 C11orf72Q8NBR9 251 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 MRPL53Q96EL3 112 aaKnown RBP8.43□□□□□ -1.06
SNHG4-208ENST00000514110 VSIG2Q96IQ7 327 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 GSN-AS1Q9NRJ2 163 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 TMEM14CQ9P0S9 112 aa8.43□□□□□ -1.06
SNHG4-208ENST00000514110 MRPS16Q9Y3D3 137 aaKnown RBP8.43□□□□□ -1.06
SNHG4-208ENST00000514110 A0A096LPF7 62 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 KLLNB2CW77 178 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 PYYP10082 97 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 HIST1H1EP10412 219 aaKnown RBP8.42□□□□□ -1.06
SNHG4-208ENST00000514110 KRTAP10-2P60368 255 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 BTN1A1Q13410 526 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 GCSAMLQ5JQS6 135 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 EXOC3-AS1Q8N2X6 119 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 BLNKQ8WV28 456 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 AGPAT4-IT1Q9H0P7 198 aa8.42□□□□□ -1.06
SNHG4-208ENST00000514110 TRGV2A0A075B6R0 118 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 RNASE4P34096 147 aaKnown RBP8.41□□□□□ -1.06
SNHG4-208ENST00000514110 STX12Q86Y82 276 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 ZNF680Q8NEM1 530 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 LINC00477Q96M19 166 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 C18orf15Q96N68 181 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 LINC00467Q9BRT7 94 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 KLF12Q9Y4X4 402 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 TIMM9Q9Y5J7 89 aa8.41□□□□□ -1.06
SNHG4-208ENST00000514110 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
SNHG4-208ENST00000514110 TRGV1A0A0A0MS02 117 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 A0A1W2PPQ1 181 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 HBG1P69891 147 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 HBG2P69892 147 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 PDE6HQ13956 83 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 ATP6V1FQ16864 119 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 ANXA2RQ3ZCQ2 193 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 PRR9Q5T870 116 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 Q6ZQT7 251 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 C9orf47Q6ZRZ4 202 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 EIF4E3Q8N5X7 224 aaKnown RBP8.4□□□□□ -1.06
SNHG4-208ENST00000514110 SLC25A2Q9BXI2 301 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 NPCDR1Q9BY65 106 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 GPN1Q9HCN4 374 aaPredicted RBP8.4□□□□□ -1.06
SNHG4-208ENST00000514110 TP53TG3Q9ULZ0 132 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
SNHG4-208ENST00000514110 IGKV2-40A0A087WW87 121 aaPredicted RBP8.39□□□□□ -1.07
SNHG4-208ENST00000514110 SPINK4O60575 86 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 MPDU1O75352 247 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 IGKV2D-40P01614 121 aaPredicted RBP8.39□□□□□ -1.07
SNHG4-208ENST00000514110 GPX1P07203 203 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 CRISP2P16562 243 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 BTF3P20290 206 aaKnown RBP8.39□□□□□ -1.07
SNHG4-208ENST00000514110 TCL1AP56279 114 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 ICAM4Q14773 271 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 ZFAND2AQ8N6M9 145 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 ANAPC16Q96DE5 110 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 FAM167A-AS1Q96KT0 104 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 VGLL1Q99990 258 aa8.39□□□□□ -1.07
SNHG4-208ENST00000514110 LINC00315P59091 139 aa8.38□□□□□ -1.07
SNHG4-208ENST00000514110 NHLH2Q02577 135 aa8.38□□□□□ -1.07
SNHG4-208ENST00000514110 FAM122CQ6P4D5 195 aa8.38□□□□□ -1.07
SNHG4-208ENST00000514110 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
SNHG4-208ENST00000514110 THAP6Q8TBB0 222 aa8.38□□□□□ -1.07
SNHG4-208ENST00000514110 CCDC32Q9BV29 185 aa8.38□□□□□ -1.07
SNHG4-208ENST00000514110 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
SNHG4-208ENST00000514110 FAM240BA0A1B0GVZ2 78 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 IGHV3-53P01767 116 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 NMBP08949 121 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 IBA57Q5T440 356 aaKnown RBP8.37□□□□□ -1.07
SNHG4-208ENST00000514110 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 Q8N1X5 172 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 OR5C1Q8NGR4 320 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 ST6GAL2Q96JF0 529 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
SNHG4-208ENST00000514110 ZNF492Q9P255 531 aa8.37□□□□□ -1.07
SNHG4-208ENST00000514110 IGHV1OR15-1A0A075B7D0 117 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 RGS13O14921 159 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 SIVA1O15304 175 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 PAX4O43316 350 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 SIX6O95475 246 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 OR10J4P0C629 311 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 NBEAP1P0C6P0 100 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 Q8TAT8 98 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 FXYD5Q96DB9 178 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 OR51M1Q9H341 326 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 SCRT2Q9NQ03 307 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 OR5AC2Q9NZP5 309 aa8.36□□□□□ -1.07
SNHG4-208ENST00000514110 DNAH5Q8TE73 4624 aa8.35□□□□□ -1.07
SNHG4-208ENST00000514110 NXPH4O95158 308 aa8.35□□□□□ -1.07
SNHG4-208ENST00000514110 ZNF138P52744 262 aa8.35□□□□□ -1.07
SNHG4-208ENST00000514110 FHL2Q14192 279 aa8.35□□□□□ -1.07
SNHG4-208ENST00000514110 PHYHIPLQ96FC7 376 aa8.35□□□□□ -1.07
SNHG4-208ENST00000514110 FAM210AQ96ND0 272 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms