RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 LYRM9A8MSI8 78 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 OR10J4P0C629 311 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 DEFB130BP0DP73 79 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 DEFB130AP0DP74 79 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 PDE6HQ13956 83 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 ICAM4Q14773 271 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 FFAR4Q5NUL3 377 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 Q6ZQT7 251 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 POM121L12Q8N7R1 296 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.42
HERC4-214ENST00000513996 RNF141Q8WVD5 230 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 FAM19A4Q96LR4 140 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 ODF3Q96PU9 254 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 VGLL1Q99990 258 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 PAXXQ9BUH6 204 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 FUT9Q9Y231 359 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 PRELID1Q9Y255 219 aa6.15□□□□□ -1.42
HERC4-214ENST00000513996 FRAS1Q86XX4 4008 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 IGKV2-40A0A087WW87 121 aaPredicted RBP6.14□□□□□ -1.43
HERC4-214ENST00000513996 C17orf112F2Z3M2 114 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 H7BYZ3 331 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 ZNF324O75467 553 aaPredicted RBP6.14□□□□□ -1.43
HERC4-214ENST00000513996 IGKV2D-40P01614 121 aaPredicted RBP6.14□□□□□ -1.43
HERC4-214ENST00000513996 LEPP41159 167 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 CD300CQ08708 224 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 FAM122CQ6P4D5 195 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 TMEM88Q6PEY1 159 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 C9orf47Q6ZRZ4 202 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 SCGB1C1Q8TD33 95 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 ASB13Q8WXK3 278 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 PHYHIPLQ96FC7 376 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 FAM210BQ96KR6 192 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 LINC00477Q96M19 166 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 C20orf144Q9BQM9 153 aa6.14□□□□□ -1.43
HERC4-214ENST00000513996 MRPL32Q9BYC8 188 aaKnown RBP6.14□□□□□ -1.43
HERC4-214ENST00000513996 NOP10Q9NPE3 64 aaKnown RBP6.14□□□□□ -1.43
HERC4-214ENST00000513996 TIMM8BQ9Y5J9 83 aaPredicted RBP6.14□□□□□ -1.43
HERC4-214ENST00000513996 KLLNB2CW77 178 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 IFNA5P01569 189 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 PET100P0DJ07 73 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 P0DMU3 169 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 FAM231AP0DMU4 169 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 FAM231CP0DMU5 169 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 RANP62826 216 aaKnown RBP6.13□□□□□ -1.43
HERC4-214ENST00000513996 ANKRD39Q53RE8 183 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 PRR9Q5T870 116 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 ZNF493Q6ZR52 646 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 ZFAND2AQ8N6M9 145 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 LINC00612Q8N6U2 182 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 TMEM263Q8WUH6 116 aaKnown RBP6.13□□□□□ -1.43
HERC4-214ENST00000513996 MED28Q9H204 178 aa6.13□□□□□ -1.43
HERC4-214ENST00000513996 SCO2A0A1W2PP80 73 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 C7orf71A4D174 169 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 CBY3A6NI87 242 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 M0R2N4 97 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 OR7C2O60412 319 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 PFDN1O60925 122 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 SLC25A5P05141 298 aaKnown RBP6.12□□□□□ -1.43
HERC4-214ENST00000513996 CRISP2P16562 243 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 RNASE4P34096 147 aaKnown RBP6.12□□□□□ -1.43
HERC4-214ENST00000513996 BTN1A1Q13410 526 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 Q9H3A6 140 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 AAMDCQ9H7C9 122 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 KCNIP2Q9NS61 270 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 ZNF492Q9P255 531 aa6.12□□□□□ -1.43
HERC4-214ENST00000513996 F5H768 121 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 HMGB3O15347 200 aaKnown RBP6.11□□□□□ -1.43
HERC4-214ENST00000513996 ATP5G1P05496 136 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 M6PRP20645 277 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 ATP5G3P48201 142 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 RAB2AP61019 212 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 CCDC28AQ8IWP9 274 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 C11orf72Q8NBR9 251 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 Q8TAT8 98 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 AQP10Q96PS8 301 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 PYGO2Q9BRQ0 406 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 GSN-AS1Q9NRJ2 163 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 TP53TG3Q9ULZ0 132 aa6.11□□□□□ -1.43
HERC4-214ENST00000513996 IGLV2-18A0A075B6J9 118 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 GAGE12BA1L429 117 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 RNF222A6NCQ9 220 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 DIRC3C9JPN6 131 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 G3V3Q6 166 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 GAGE7O76087 117 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 GPX1P07203 203 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 NMBP08949 121 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 GIPP09681 153 aaPredicted RBP6.1□□□□□ -1.43
HERC4-214ENST00000513996 GAGE12FP0CL80 117 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 GAGE12GP0CL81 117 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 GAGE12IP0CL82 117 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 ZNF138P52744 262 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 UBE2L3P68036 154 aaKnown RBP6.1□□□□□ -1.43
HERC4-214ENST00000513996 ACOT6Q3I5F7 207 aaPredicted RBP6.1□□□□□ -1.43
HERC4-214ENST00000513996 Q6ZR54 194 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 Q6ZTI0 123 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 AKAP14Q86UN6 197 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 TCTE3Q8IZS6 198 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 LYPD1Q8N2G4 141 aa6.1□□□□□ -1.43
HERC4-214ENST00000513996 LINC00467Q9BRT7 94 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms