RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 RAB31Q13636 194 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 TMEM170AQ8WVE7 144 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 APH1BQ8WW43 257 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 TMEM80Q96HE8 168 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 SPXQ9BT56 116 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 MLST8Q9BVC4 326 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 C8orf4Q9NR00 106 aa4.51□□□□□ -1.69
CLDND1-229ENST00000513988 EFCAB10A6NFE3 127 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 M0R2T5 61 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 GYS2P54840 703 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 OPCMLQ14982 345 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 GGNBP1Q5YKI7 109 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 TBC1D26Q86UD7 250 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 HOGA1Q86XE5 327 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 LGI3Q8N145 548 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 LINC00477Q96M19 166 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 TRGV9Q99603 122 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
CLDND1-229ENST00000513988 TRBV6-4A0A1B0GX49 114 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 KRTAP23-1A1A580 65 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 FBLL1A6NHQ2 334 aaKnown RBP4.49□□□□□ -1.69
CLDND1-229ENST00000513988 CEBPZOSA8MTT3 80 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 KLLNB2CW77 178 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 EI24O14681 340 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 MYL12BO14950 172 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 NDUFS6O75380 124 aaKnown RBP4.49□□□□□ -1.69
CLDND1-229ENST00000513988 WBP4O75554 376 aaKnown RBP4.49□□□□□ -1.69
CLDND1-229ENST00000513988 ENHOQ6UWT2 76 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 ARL6IP6Q8N6S5 226 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 OR5AP2Q8NGF4 316 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 SLC50A1Q9BRV3 221 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 ZNF2Q9BSG1 426 aaPredicted RBP4.49□□□□□ -1.69
CLDND1-229ENST00000513988 CHCHD7Q9BUK0 85 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 ZNF331Q9NQX6 463 aaPredicted RBP4.49□□□□□ -1.69
CLDND1-229ENST00000513988 EHFQ9NZC4 300 aa4.49□□□□□ -1.69
CLDND1-229ENST00000513988 IGLV7-46A0A075B6I9 117 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 H3BRN7 92 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 ARL6IP5O75915 188 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 MT-ND6P03923 174 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 GPX1P07203 203 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 OR4E1P0C645 316 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 CXCL2P19875 107 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 NMSQ5H8A3 153 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 LCN15Q6UWW0 184 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 DHRSXQ8N5I4 330 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 CYB561D1Q8N8Q1 229 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 PRSS3P2Q8NHM4 247 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 RNASE11Q8TAA1 199 aaKnown RBP4.48□□□□□ -1.69
CLDND1-229ENST00000513988 SHANK2-AS3Q9BTD1 123 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 FXYD6Q9H0Q3 95 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 AUNIPQ9H7T9 357 aa4.48□□□□□ -1.69
CLDND1-229ENST00000513988 PMS2P5A8MQ11 134 aa4.47□□□□□ -1.69
CLDND1-229ENST00000513988 H0Y9J4 135 aa4.47□□□□□ -1.69
CLDND1-229ENST00000513988 TNFAIP8O95379 198 aa4.47□□□□□ -1.69
CLDND1-229ENST00000513988 FCGR1AP12314 374 aa4.47□□□□□ -1.69
CLDND1-229ENST00000513988 GPR107Q5VW38 600 aa4.47□□□□□ -1.69
CLDND1-229ENST00000513988 DHRS11Q6UWP2 260 aa4.47□□□□□ -1.69
CLDND1-229ENST00000513988 C9orf85Q96MD7 179 aa4.47□□□□□ -1.69
CLDND1-229ENST00000513988 C5orf51A6NDU8 294 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 GAGE12JA6NER3 117 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 ANKRD65E5RJM6 399 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 SCGNO76038 276 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 SNRPCP09234 159 aaKnown RBP4.46□□□□□ -1.7
CLDND1-229ENST00000513988 KRTAP1-4P0C5Y4 121 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 GPX4P36969 197 aaPredicted RBP4.46□□□□□ -1.7
CLDND1-229ENST00000513988 RAP2BP61225 183 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 GAGE1Q13065 139 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 GAGE4Q13068 117 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 GAGE5Q13069 117 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 BAK1Q16611 211 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 MIAQ16674 131 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 GAGE13Q4V321 117 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 CROCCP3Q8IVE0 287 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 C15orf54Q8N8G6 183 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 LHFPL5Q8TAF8 219 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 MARCH1Q8TCQ1 289 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 C20orf85Q9H1P6 137 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 AP4S1Q9Y587 144 aa4.46□□□□□ -1.7
CLDND1-229ENST00000513988 IGLV10-54A0A075B6I4 117 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 IGHV3-73A0A0B4J1V6 119 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 A0A0G2JRQ6 117 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 IFITM5A6NNB3 132 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 M0R2P5 195 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 ZNF253O75346 499 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 ANXA7P20073 488 aaKnown RBP4.45□□□□□ -1.7
CLDND1-229ENST00000513988 SEC61BP60468 96 aaKnown RBP4.45□□□□□ -1.7
CLDND1-229ENST00000513988 ERCC8Q13216 396 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 C1orf137Q5JT78 98 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 MUC21Q5SSG8 566 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 LPCAT3Q6P1A2 487 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 TMEM91Q6ZNR0 172 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 CCDC197Q8NCU1 140 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 SUN5Q8TC36 379 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 SAT2Q96F10 170 aaPredicted RBP4.45□□□□□ -1.7
CLDND1-229ENST00000513988 SRRQ9GZT4 340 aa4.45□□□□□ -1.7
CLDND1-229ENST00000513988 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms