RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 DUX5Q96PT3 197 aa11.38□□□□□ -0.59
VCAN-211ENST00000513984 HIST1H2BLQ99880 126 aa11.38□□□□□ -0.59
VCAN-211ENST00000513984 NDFIP1Q9BT67 221 aa11.38□□□□□ -0.59
VCAN-211ENST00000513984 SOCS3O14543 225 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 CRISP2P16562 243 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 HBBP68871 147 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 GDF5OSQ5U4N7 250 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 C16orf92Q96LL3 132 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 UBE2E2Q96LR5 201 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 RHPN1-AS1Q9BWJ2 59 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 SH2D1AO60880 128 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 GZMBP10144 247 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 FABP4P15090 132 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 ERCC8Q13216 396 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
VCAN-211ENST00000513984 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
VCAN-211ENST00000513984 GRIFINA4D1Z8 144 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 APCSP02743 223 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 AMBPP02760 352 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 Q0VG73 95 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 SLAQ13239 276 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 C9orf47Q6ZRZ4 202 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 NRN1Q9NPD7 142 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 PPP1R14DQ9NXH3 145 aa11.36□□□□□ -0.59
VCAN-211ENST00000513984 BMI1P35226 326 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 Q6AWC8 147 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 OR10D4PQ8NGN7 298 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 TP53TG3Q9ULZ0 132 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 GCN1Q92616 2671 aaKnown RBP11.35□□□□□ -0.59
VCAN-211ENST00000513984 A0A1B0GUS0 222 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 CAMPP49913 170 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 ZNF80P51504 273 aaPredicted RBP11.35□□□□□ -0.59
VCAN-211ENST00000513984 SRSF2Q01130 221 aaKnown RBP11.35□□□□□ -0.59
VCAN-211ENST00000513984 REC114Q7Z4M0 266 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 C20orf173Q96LM9 149 aa11.35□□□□□ -0.59
VCAN-211ENST00000513984 PACRGQ96M98 296 aaPredicted RBP11.35□□□□□ -0.59
VCAN-211ENST00000513984 DNAJC9-AS1A6NH13 148 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 A8MWP6 167 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 HAX1O00165 279 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 ZNF138P52744 262 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 KIAA1644Q3SXP7 199 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 OR10J3Q5JRS4 329 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 TMEM78Q5T7P6 136 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 TMEM256Q8N2U0 113 aa11.34□□□□□ -0.59
VCAN-211ENST00000513984 TMEM213A2RRL7 107 aa11.33□□□□□ -0.6
VCAN-211ENST00000513984 TMEM189A5PLL7 270 aa11.33□□□□□ -0.6
VCAN-211ENST00000513984 LGALS9O00182 355 aa11.33□□□□□ -0.6
VCAN-211ENST00000513984 ESDP10768 282 aa11.33□□□□□ -0.6
VCAN-211ENST00000513984 LINC00310P59036 64 aa11.33□□□□□ -0.6
VCAN-211ENST00000513984 AKAP9Q99996 3911 aa11.33□□□□□ -0.6
VCAN-211ENST00000513984 IGHV4OR15-8A0A075B7B6 117 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 A0A087WW49 117 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 EDN2P20800 178 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 SRIP30626 198 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 KLHDC1Q8N7A1 406 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 ZNF738Q8NE65 137 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 YAE1D1Q9NRH1 226 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 FAM181BA6NEQ2 426 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 FABP5P3A8MUU1 101 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 NUPR1O60356 82 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 RPS20P60866 119 aaKnown RBP11.32□□□□□ -0.6
VCAN-211ENST00000513984 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
VCAN-211ENST00000513984 LENEPQ9Y5L5 61 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 MYO9AB2RTY4 2548 aa11.32□□□□□ -0.6
VCAN-211ENST00000513984 ACANP16112 2415 aa11.31□□□□□ -0.6
VCAN-211ENST00000513984 A0A1B0GW15 77 aa11.31□□□□□ -0.6
VCAN-211ENST00000513984 OVOL1O14753 267 aa11.31□□□□□ -0.6
VCAN-211ENST00000513984 ARMS2P0C7Q2 107 aa11.31□□□□□ -0.6
VCAN-211ENST00000513984 RPL11P62913 178 aaKnown RBP11.31□□□□□ -0.6
VCAN-211ENST00000513984 SAMD13Q5VXD3 122 aa11.31□□□□□ -0.6
VCAN-211ENST00000513984 Q6ZSV7 163 aa11.31□□□□□ -0.6
VCAN-211ENST00000513984 GATD1Q8NB37 220 aa11.31□□□□□ -0.6
VCAN-211ENST00000513984 SERF1AO75920 110 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
VCAN-211ENST00000513984 RIGQ13278 110 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 LINC01559Q495D7 138 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 ESM1Q9NQ30 184 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 F2Z2F3 143 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 SYNJ2BPP57105 145 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 LINC00477Q96M19 166 aa11.3□□□□□ -0.6
VCAN-211ENST00000513984 TMSB15BA0A087X1C1 80 aa11.29□□□□□ -0.6
VCAN-211ENST00000513984 HIST1H1AQ02539 215 aaPredicted RBP11.29□□□□□ -0.6
VCAN-211ENST00000513984 KLF5Q13887 457 aaPredicted RBP11.29□□□□□ -0.6
VCAN-211ENST00000513984 OR10J6PQ8NGY7 276 aa11.29□□□□□ -0.6
VCAN-211ENST00000513984 C18orf32Q8TCD1 76 aa11.29□□□□□ -0.6
VCAN-211ENST00000513984 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
VCAN-211ENST00000513984 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
VCAN-211ENST00000513984 TMEM160Q9NX00 188 aa11.29□□□□□ -0.6
VCAN-211ENST00000513984 FASNP49327 2511 aaKnown RBP11.29□□□□□ -0.6
VCAN-211ENST00000513984 ANK3Q12955 4377 aaKnown RBP11.29□□□□□ -0.6
VCAN-211ENST00000513984 IGLC6P0CF74 106 aa11.28□□□□□ -0.6
VCAN-211ENST00000513984 CTRLP40313 264 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms