RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 PSG8Q9UQ74 426 aa7.5□□□□□ -1.21
TPM3-221ENST00000513769 IGHV4OR15-8A0A075B7B6 117 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 IGHV3OR16-8A0A075B7F1 116 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 A0A087WW49 117 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 FOLR2P14207 255 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 ELOBQ15370 118 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 COX19Q49B96 90 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 IBA57Q5T440 356 aaKnown RBP7.49□□□□□ -1.21
TPM3-221ENST00000513769 GOLT1AQ6ZVE7 132 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 DAZAP1Q96EP5 407 aaKnown RBP7.49□□□□□ -1.21
TPM3-221ENST00000513769 C16orf92Q96LL3 132 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
TPM3-221ENST00000513769 TRAV25A0A0B4J276 109 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 TMEM213A2RRL7 107 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 C2orf70A6NJV1 201 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 K7EN84 100 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 SLC17A3O00476 420 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 ZNF207O43670 478 aaKnown RBP7.48□□□□□ -1.21
TPM3-221ENST00000513769 SNRPCP09234 159 aaKnown RBP7.48□□□□□ -1.21
TPM3-221ENST00000513769 FOXA3P55318 350 aaPredicted RBP7.48□□□□□ -1.21
TPM3-221ENST00000513769 CMC4P56277 68 aaPredicted RBP7.48□□□□□ -1.21
TPM3-221ENST00000513769 SYNJ2BPP57105 145 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 FHL3Q13643 280 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 KRTAP19-4Q3LI73 84 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 CT83Q5H943 113 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 CBLN2Q8IUK8 224 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 FAM24BQ8N5W8 94 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 OR9G4Q8NGQ1 327 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 SAV1Q9H4B6 383 aaPredicted RBP7.48□□□□□ -1.21
TPM3-221ENST00000513769 IL36BQ9NZH7 164 aa7.48□□□□□ -1.21
TPM3-221ENST00000513769 TRAV8-2A0A0B4J237 113 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 TRAV34A0A0B4J273 112 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 A8MWL6 223 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 H3BTX0 84 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 CCL24O00175 119 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 SOCS3O14543 225 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 RPL11P62913 178 aaKnown RBP7.47□□□□□ -1.21
TPM3-221ENST00000513769 GNG5P63218 68 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 SRSF2Q01130 221 aaKnown RBP7.47□□□□□ -1.21
TPM3-221ENST00000513769 TCF24Q7RTU0 167 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 NDUFA11Q86Y39 141 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 KLHL30-AS1Q8NEE0 82 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 NUDT10Q8NFP7 164 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 OR4B1Q8NGF8 309 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 NUDT11Q96G61 164 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 PRR25Q96S07 402 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 NDFIP1Q9BT67 221 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 GFRA4Q9GZZ7 299 aa7.47□□□□□ -1.21
TPM3-221ENST00000513769 IGHV3OR16-13A0A075B7E8 117 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 IGHV3-74A0A0B4J1X5 117 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 IGHV3-66A0A0C4DH42 116 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 C19orf71A6NCJ1 209 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 PGPEP1LA6NFU8 196 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 FABP5P3A8MUU1 101 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 NPIPB6E9PJ23 425 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 M0R3E3 92 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 GATCO43716 136 aaKnown RBP7.46□□□□□ -1.22
TPM3-221ENST00000513769 TYMSP04818 313 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 CT45A10P0DMU9 189 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 MGST1P10620 155 aaKnown RBP7.46□□□□□ -1.22
TPM3-221ENST00000513769 CD28P10747 220 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 RAB5AP20339 215 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 SNRPD3P62318 126 aaKnown RBP7.46□□□□□ -1.22
TPM3-221ENST00000513769 TMEM78Q5T7P6 136 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 RASL11AQ6T310 242 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 PRNTQ86SH4 94 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 DCANP1Q8TF63 244 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 ASCL2Q99929 193 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 V9GYV3 84 aa7.46□□□□□ -1.22
TPM3-221ENST00000513769 SONP18583 2426 aaKnown RBP7.46□□□□□ -1.22
TPM3-221ENST00000513769 NBEAL1Q6ZS30 2694 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 IGHV3-49A0A0A0MS15 119 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 SMIM27A0A1W2PRY6 76 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 XKRY2A2RUG3 117 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 ZNF705GA8MUZ8 300 aaPredicted RBP7.45□□□□□ -1.22
TPM3-221ENST00000513769 P01737 135 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 CSN3P07498 182 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 ZNF138P52744 262 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 OR5I1Q13606 314 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 SMUG1Q53HV7 270 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 OR10J6PQ8NGY7 276 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 DLX4Q92988 240 aaPredicted RBP7.45□□□□□ -1.22
TPM3-221ENST00000513769 FAM210BQ96KR6 192 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 CITED2Q99967 270 aaPredicted RBP7.45□□□□□ -1.22
TPM3-221ENST00000513769 AGPAT4-IT1Q9H0P7 198 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 MS4A6AQ9H2W1 248 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 SRD5A3Q9H8P0 318 aa7.45□□□□□ -1.22
TPM3-221ENST00000513769 AURKAIP1Q9NWT8 199 aaPredicted RBP7.45□□□□□ -1.22
TPM3-221ENST00000513769 ZNF705FA8MVS1 300 aaPredicted RBP7.44□□□□□ -1.22
TPM3-221ENST00000513769 K7EQG2 157 aa7.44□□□□□ -1.22
TPM3-221ENST00000513769 RPS20P60866 119 aaKnown RBP7.44□□□□□ -1.22
TPM3-221ENST00000513769 DEFB114Q30KQ6 69 aa7.44□□□□□ -1.22
TPM3-221ENST00000513769 RBPMS2Q6ZRY4 209 aaKnown RBP7.44□□□□□ -1.22
TPM3-221ENST00000513769 Q86TA4 180 aa7.44□□□□□ -1.22
TPM3-221ENST00000513769 OR2K2Q8NGT1 345 aa7.44□□□□□ -1.22
TPM3-221ENST00000513769 RAX2Q96IS3 184 aa7.44□□□□□ -1.22
TPM3-221ENST00000513769 NAT8BQ9UHF3 227 aa7.44□□□□□ -1.22
TPM3-221ENST00000513769 RPH3ALQ9UNE2 315 aa7.44□□□□□ -1.22
TPM3-221ENST00000513769 TRAV8-1A0A0A6YYK1 113 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms