RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 VBP1P61758 197 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 RRAS2P62070 204 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-227ENST00000513452 SLC38A11Q08AI6 406 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 MORN5Q5VZ52 161 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 CLVS1Q8IUQ0 354 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-227ENST00000513452 IQCF2Q8IXL9 164 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 NHLRC2Q8NBF2 726 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 OR10P1Q8NGE3 313 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 SAT2Q96F10 170 aaPredicted RBP6.9□□□□□ -1.3
CLDND1-227ENST00000513452 TM2D2Q9BX73 214 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 Q9H521 79 aa6.9□□□□□ -1.3
CLDND1-227ENST00000513452 IGHV1OR15-1A0A075B7D0 117 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 DUXBA0A1W2PPF3 345 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 GPX1P07203 203 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
CLDND1-227ENST00000513452 ZNF846Q147U1 533 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 OPCMLQ14982 345 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 ACOT6Q3I5F7 207 aaPredicted RBP6.89□□□□□ -1.31
CLDND1-227ENST00000513452 OR10J3Q5JRS4 329 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 PRR9Q5T870 116 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 Q6ZQT7 251 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 OR10G4Q8NGN3 311 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 C15orf40Q8WUR7 153 aa6.89□□□□□ -1.31
CLDND1-227ENST00000513452 DAZAP1Q96EP5 407 aaKnown RBP6.89□□□□□ -1.31
CLDND1-227ENST00000513452 RBFOX3A6NFN3 312 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 K7EPK0 472 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 M0R3E3 92 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 COX7A2P2O60397 106 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 SLC25A6P12236 298 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 TIRAPP58753 221 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 ASAH1Q13510 395 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 LAGE3Q14657 143 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 PXDC1Q5TGL8 231 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 C9orf47Q6ZRZ4 202 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 SH2D6Q7Z4S9 175 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 TMEM37Q8WXS4 190 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 FAM19A4Q96LR4 140 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 SCGB3A2Q96PL1 93 aa6.88□□□□□ -1.31
CLDND1-227ENST00000513452 PIGBOS1A0A0B4J2F0 54 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 GOSR2O14653 212 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 TDRG1Q3Y452 100 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 ZNF546Q86UE3 836 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 ZFAND2AQ8N6M9 145 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 SMIM4Q8WVI0 70 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 BAALCQ8WXS3 180 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 AP3S1Q92572 193 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 AGPAT4-IT1Q9H0P7 198 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 SCP2D1Q9UJQ7 156 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 RABL2BQ9UNT1 228 aa6.87□□□□□ -1.31
CLDND1-227ENST00000513452 AGPAT2O15120 278 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 CRISP2P16562 243 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 MRPS10P82664 201 aaKnown RBP6.86□□□□□ -1.31
CLDND1-227ENST00000513452 GUK1Q16774 197 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 C10orf113Q5VZT2 155 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 Q8N3U1 123 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 LINC00477Q96M19 166 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 SRRQ9GZT4 340 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 MCUBQ9NWR8 336 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 PSENENQ9NZ42 101 aa6.86□□□□□ -1.31
CLDND1-227ENST00000513452 CCDC59Q9P031 241 aaKnown RBP6.86□□□□□ -1.31
CLDND1-227ENST00000513452 IGKV2-40A0A087WW87 121 aaPredicted RBP6.85□□□□□ -1.31
CLDND1-227ENST00000513452 TRAV4A0A0B4J268 109 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 IGKV2D-40P01614 121 aaPredicted RBP6.85□□□□□ -1.31
CLDND1-227ENST00000513452 IGLV2-11P01706 119 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 C4orf46Q504U0 113 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 MUC21Q5SSG8 566 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 MRPL53Q96EL3 112 aaKnown RBP6.85□□□□□ -1.31
CLDND1-227ENST00000513452 FUNDC2Q9BWH2 189 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 NPVFQ9HCQ7 196 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 VCX3AQ9NNX9 186 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 MGAT4CQ9UBM8 478 aa6.85□□□□□ -1.31
CLDND1-227ENST00000513452 IGHV3-16A0A0C4DH30 117 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 ANKRD20A5PA0PJZ0 165 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 SSSCA1O60232 199 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 ZNF253O75346 499 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 HOXB5P09067 269 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 METTL15P1P0C7V9 234 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 POLR2GP62487 172 aaKnown RBP eCLIP6.84□□□□□ -1.31
CLDND1-227ENST00000513452 OR4C5Q8NGB2 326 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 RAB2BQ8WUD1 216 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 RASL10AQ92737 203 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 MIXL1Q9H2W2 232 aa6.84□□□□□ -1.31
CLDND1-227ENST00000513452 TRBV19A0A075B6N1 114 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 TRAV8-3A0A0A6YYJ7 113 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 FNDC10F2Z333 226 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 RGS5O15539 181 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 PFN1P07737 140 aaKnown RBP6.83□□□□□ -1.32
CLDND1-227ENST00000513452 NMBP08949 121 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 TMEM183BQ1AE95 376 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 TMEM128Q5BJH2 165 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 TMEM78Q5T7P6 136 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 LELP1Q5T871 98 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 TMEM183AQ8IXX5 376 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 Q8N976 141 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 ATP6V0E2Q8NHE4 81 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 SOSTQ9BQB4 213 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 SPXQ9BT56 116 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 PKHD1L1Q86WI1 4243 aa6.83□□□□□ -1.32
CLDND1-227ENST00000513452 FABP12A6NFH5 140 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms