RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 HHLA3Q9XRX5 114 aa2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 RCL1Q9Y2P8 373 aaKnown RBP2.36□□□□□ -2.03
PDLIM5-218ENST00000513341 TRGV2A0A075B6R0 118 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 TRAV12-2A0A075B6T6 113 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 TRAV1-2A0A0B4J238 106 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 IGHV3-38A0A0C4DH36 116 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 A0A0D9SG52 128 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 SNRPGP15A8MWD9 76 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 SSX5O60225 188 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 ORM1P02763 201 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 FCER2P06734 321 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 OR5AC1P0C628 307 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 HSMCR30P0CW71 290 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 CBX5P45973 191 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 HNRNPA3P51991 378 aaKnown RBP2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 RND2P52198 227 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 CRYBA4P53673 196 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 FXYD4P59646 89 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 RHOBP62745 196 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 LAGE3Q14657 143 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 SPHARQ15513 63 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 C2orf83Q53S99 150 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 LINC01556Q5JQF7 62 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 SLC35G3Q8N808 338 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 Q8N976 141 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 CCDC197Q8NCU1 140 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 OR1B1Q8NGR6 318 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 FAM218AQ96MZ4 157 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 GPN1Q9HCN4 374 aaPredicted RBP2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 ENY2Q9NPA8 101 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 ACOT13Q9NPJ3 140 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 PRR34Q9NV39 138 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 CACFD1Q9UGQ2 172 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 LPAP08519 4548 aa2.35□□□□□ -2.03
PDLIM5-218ENST00000513341 A0A0A6YYH2 397 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 XKRY2A2RUG3 117 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 RNF222A6NCQ9 220 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 TMEM235A6NFC5 223 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 RBFOX3A6NFN3 312 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 A6NJ64 397 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 C9JCJ5 164 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 CCSO14618 274 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 SPINK4O60575 86 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 IGKV1-39P01597 117 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 IGKV1D-39P04432 117 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 SRIP30626 198 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 GPX4P36969 197 aaPredicted RBP2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 TAS2R20P59543 309 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 SPCS3P61009 180 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 CD300CQ08708 224 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 OR2F1Q13607 317 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 C1orf146Q5VVC0 180 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 ZFP1Q6P2D0 407 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 CD164L2Q6UWJ8 174 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 Q6ZTI0 123 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 TMEM17Q86X19 198 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 WFDC10BQ8IUB3 73 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 BAP18Q8IXM2 172 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 ZNF680Q8NEM1 530 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 OR8A1Q8NGG7 326 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 UFD1Q92890 307 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 TXNDC17Q9BRA2 123 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 RSG1Q9BU20 258 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 SLC25A39Q9BZJ4 359 aaPredicted RBP2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 SH3BGRL3Q9H299 93 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 PARLQ9H300 379 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 VCX3BQ9H321 246 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 RPS10P5Q9NQ39 176 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 FKBP14Q9NWM8 211 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 CRCT1Q9UGL9 99 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 FUT9Q9Y231 359 aa2.34□□□□□ -2.03
PDLIM5-218ENST00000513341 TRAV8-2A0A0B4J237 113 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 TRAV8-6A0A0B4J262 113 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 A0A0J9YXV3 536 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 F8WDY8 70 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 H0Y8G0 127 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 ATP5HO75947 161 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 PTHLHP12272 177 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 RAB3BP20337 219 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 Q6ZVQ6 151 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 Q8NBF4 154 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 CYGBQ8WWM9 190 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 PPP1R14BQ96C90 147 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 VGLL1Q99990 258 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 BCL7BQ9BQE9 202 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 ZNF2Q9BSG1 426 aaPredicted RBP2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 PBDC1Q9BVG4 233 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 NDUFA13Q9P0J0 144 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 RNF24Q9Y225 148 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 LSM2Q9Y333 95 aaKnown RBP2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 FSIP2Q5CZC0 6907 aa2.33□□□□□ -2.04
PDLIM5-218ENST00000513341 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 TRGV1A0A0A0MS02 117 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 ZFP92A6NM28 416 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 GABARAPH6UMI1 98 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 GABARAPO95166 117 aa2.32□□□□□ -2.04
PDLIM5-218ENST00000513341 IGKV1-5P01602 117 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms