RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ODF3Q96PU9 254 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 TCEAL7Q9BRU2 100 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 C1QTNF4Q9BXJ3 329 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 CSTL1Q9H114 145 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 RPH3ALQ9UNE2 315 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 YTHDF2Q9Y5A9 579 aaKnown RBP5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 FBN3Q75N90 2809 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 PRKDCP78527 4128 aaKnown RBP5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 K7EQM0 130 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 UBE2CO00762 179 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 CA1P00915 261 aaPredicted RBP5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 IGKV3-20P01619 116 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 AMBPP02760 352 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 TCRAP04437 139 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 TAGLN2P37802 199 aaKnown RBP5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 ATP5G3P48201 142 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 GNG5P63218 68 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 PMS2P11Q13670 270 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 HAGHQ16775 308 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 TMEM78Q5T7P6 136 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 CST9LP1Q5W188 147 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 AMTNQ6UX39 209 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 ZNF767PQ75MW2 155 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 CYB561D1Q8N8Q1 229 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 HIST1H2BAQ96A08 127 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 LINC00477Q96M19 166 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 TXNDC17Q9BRA2 123 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 ATG101Q9BSB4 218 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 SLC35B3Q9H1N7 401 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 PPP1R14DQ9NXH3 145 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 GNG13Q9P2W3 67 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 EPDR1Q9UM22 224 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 MEGF8Q7Z7M0 2845 aa5.56□□□□□ -1.52
HMGXB3-204ENST00000513318 TRBV7-9A0A0J9YWB2 115 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 FBLL1A6NHQ2 334 aaKnown RBP5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 C11orf94C9JXX5 98 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 F6UZH7 168 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 PEX7O00628 323 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 PRB4P10163 310 aaPredicted RBP5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 BCL2P10415 239 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 TSPOP30536 169 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 CDKN1BP46527 198 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 CCL20P78556 96 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 IFITM2Q01629 132 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 SPINK13Q1W4C9 94 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 DEFB135Q30KP9 77 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 GOLT1AQ6ZVE7 132 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 Q6ZWC4 215 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 SBSPONQ8IVN8 264 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 CCDC28AQ8IWP9 274 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 TMEM75Q8N9X5 138 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 VGLL1Q99990 258 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 SPATA25Q9BR10 227 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 TM2D3Q9BRN9 247 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 ZMAT4Q9H898 229 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 LENEPQ9Y5L5 61 aa5.55□□□□□ -1.52
HMGXB3-204ENST00000513318 M0R2Z0 102 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 INSP01308 110 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 NMBP08949 121 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 GIG44P09565 113 aaPredicted RBP5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 CT45A10P0DMU9 189 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 LEPP41159 167 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 ZNF138P52744 262 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 MEF2BQ02080 365 aaPredicted RBP5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 ERCC8Q13216 396 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 ASCL2Q99929 193 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 NDFIP1Q9BT67 221 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 AGPAT4-IT1Q9H0P7 198 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 ZNF492Q9P255 531 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 XCL2Q9UBD3 114 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 VAX2Q9UIW0 290 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 TP53TG1Q9Y2A0 90 aa5.54□□□□□ -1.52
HMGXB3-204ENST00000513318 TRAV8-1A0A0A6YYK1 113 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 CRXO43186 299 aaPredicted RBP5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 PDE6DO43924 150 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 NHLRC4P0CG21 123 aaPredicted RBP5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 CRISP2P16562 243 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 AKR1C3P42330 323 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 FXYD7P58549 80 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 RAB14P61106 215 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 UBE2G1P62253 170 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 FLI1Q01543 452 aaPredicted RBP5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 CSNK1G2-AS1Q8NCQ2 148 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 Q8TAT8 98 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 RNF183Q96D59 192 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 FAM19A4Q96LR4 140 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 IGF2BP2-AS1Q96M15 143 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 FAM210AQ96ND0 272 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 RCHY1Q96PM5 261 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 C20orf144Q9BQM9 153 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 COL7A1Q02388 2944 aa5.53□□□□□ -1.52
HMGXB3-204ENST00000513318 TRAV12-2A0A075B6T6 113 aa5.52□□□□□ -1.53
HMGXB3-204ENST00000513318 RBFOX3A6NFN3 312 aa5.52□□□□□ -1.53
HMGXB3-204ENST00000513318 KLLNB2CW77 178 aa5.52□□□□□ -1.53
HMGXB3-204ENST00000513318 SPRY2O43597 315 aa5.52□□□□□ -1.53
HMGXB3-204ENST00000513318 NDUFS6O75380 124 aaKnown RBP5.52□□□□□ -1.53
HMGXB3-204ENST00000513318 IGLV2-11P01706 119 aa5.52□□□□□ -1.53
HMGXB3-204ENST00000513318 S100A9P06702 114 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms