RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 ATP6V0E2Q8NHE4 81 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 C8orf49Q96NF6 230 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 SSBP4Q9BWG4 385 aaPredicted RBP3.35□□□□□ -1.87
VCAN-209ENST00000513016 ESPL1Q14674 2120 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 IGHV3-64A0A075B6Q5 118 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 A6NDX4 124 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 HERVK_113P63121 156 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 DUX4L9Q6RFH8 374 aaPredicted RBP3.35□□□□□ -1.87
VCAN-209ENST00000513016 C5orf56Q8N8D9 126 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 ICE1Q9Y2F5 2266 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 SPRY2O43597 315 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 NCR2O95944 276 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 HLA-DRB4P13762 266 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
VCAN-209ENST00000513016 MLANAQ16655 118 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 IGFBPL1Q8WX77 278 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 TMEM242Q9NWH2 141 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 HLA-DRB4X5D2U9 266 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 A0A1B0GWB2 263 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 LINC00518Q8N0U6 118 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 AJUBAQ96IF1 538 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 EP300Q09472 2414 aaPredicted RBP3.35□□□□□ -1.87
VCAN-209ENST00000513016 HEATR5BQ9P2D3 2071 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 IGHG2P01859 326 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 IGLC1P0CG04 106 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 ATOH7Q8N100 152 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 WFDC1Q9HC57 220 aa3.35□□□□□ -1.87
VCAN-209ENST00000513016 H0YIZ8 118 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 ADMP35318 185 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 VOPP1Q96AW1 172 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 PLXNA3P51805 1871 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 PTPRFP10586 1907 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 TRAV12-2A0A075B6T6 113 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 ZNF503-AS2A6NEH8 195 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 PRR31Q5SQ13 230 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 C11orf45Q8TAV5 145 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 PRR25Q96S07 402 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 Q5BKY6 102 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 SIRPDQ9H106 197 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 MRPL36Q9P0J6 103 aaKnown RBP3.34□□□□□ -1.87
VCAN-209ENST00000513016 IGHV7-81A0A0B4J1V7 117 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 SMIM9A6NGZ8 99 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 C2orf70A6NJV1 201 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 IGLL5B9A064 214 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 BUB3O43684 328 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 MMP23AO75900 390 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 GYPEP15421 78 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 TIRAPP58753 221 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 DEFB136Q30KP8 78 aa3.34□□□□□ -1.87
VCAN-209ENST00000513016 IGHV4OR15-8A0A075B7B6 117 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 A0A087WW49 117 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 A8MXK9 166 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 LY6G6DO95868 133 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 BLCAPP62952 87 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 Q6YL49 198 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 Q8N8P6 123 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 Q8N9W7 124 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 HSD52Q0P140 79 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 VSIRQ9H7M9 311 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 GSN-AS1Q9NRJ2 163 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 SIGLEC8Q9NYZ4 499 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 SDHAF1A6NFY7 115 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 FAM19A2Q8N3H0 131 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 ZNF491Q8N8L2 437 aa3.34□□□□□ -1.88
VCAN-209ENST00000513016 ZSWIM8A7E2V4 1837 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 GREB1Q4ZG55 1949 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 A0A096LPF7 62 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 SERF1AO75920 110 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 FSTL3O95633 263 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 INAFM2P0DMQ5 153 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 IGKV1-6A0A0C4DH72 117 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 LINC00205P59089 165 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 WT1-ASQ06250 92 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 DAZ2Q13117 558 aaKnown RBP3.33□□□□□ -1.88
VCAN-209ENST00000513016 C16orf54Q6UWD8 224 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 DAZ4Q86SG3 579 aaKnown RBP3.33□□□□□ -1.88
VCAN-209ENST00000513016 NUP35Q8NFH5 326 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 C20orf78Q9BR46 151 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 DAZ3Q9NR90 486 aaKnown RBP3.33□□□□□ -1.88
VCAN-209ENST00000513016 TRAV8-1A0A0A6YYK1 113 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 Q0VG73 95 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 C5orf24Q7Z6I8 188 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 FANCD2OSQ96PS1 177 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 NDUFAF3Q9BU61 184 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 MEGF9Q9H1U4 602 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 TP53TG1Q9Y2A0 90 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 FRMPD3Q5JV73 1810 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 ETDCA0A1B0GVM5 59 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 TMEM95Q3KNT9 176 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 CAMK2N2Q96S95 79 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 IGLV2-23P01705 113 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 IGLV3-1P01715 115 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 SEM1Q6ZVN7 128 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 ORAOV1Q8WV07 137 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 SIP14410 1827 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 K7EMI3 77 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 IGKV1-39P01597 117 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 IGKV1D-39P04432 117 aa3.33□□□□□ -1.88
VCAN-209ENST00000513016 LINC01551Q86U37 167 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms