RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 Q9H8V8 135 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 DNAJC4Q9NNZ3 241 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 LINC00588Q9Y4M8 146 aa5.01□□□□□ -1.61
USP46-208ENST00000512656 TRAV26-1A0A087WT03 109 aa5□□□□□ -1.61
USP46-208ENST00000512656 LINC00854A0A1B0GVQ3 168 aa5□□□□□ -1.61
USP46-208ENST00000512656 C7orf66A4D0T2 115 aa5□□□□□ -1.61
USP46-208ENST00000512656 H3BNG1 76 aa5□□□□□ -1.61
USP46-208ENST00000512656 MBPP02686 304 aaPredicted RBP5□□□□□ -1.61
USP46-208ENST00000512656 BTF3P20290 206 aaKnown RBP5□□□□□ -1.61
USP46-208ENST00000512656 PVALBP20472 110 aaPredicted RBP5□□□□□ -1.61
USP46-208ENST00000512656 BCAP31P51572 246 aa5□□□□□ -1.61
USP46-208ENST00000512656 BAK1Q16611 211 aa5□□□□□ -1.61
USP46-208ENST00000512656 GFI1BQ5VTD9 330 aa5□□□□□ -1.61
USP46-208ENST00000512656 PYGO2Q9BRQ0 406 aa5□□□□□ -1.61
USP46-208ENST00000512656 C20orf85Q9H1P6 137 aa5□□□□□ -1.61
USP46-208ENST00000512656 RCL1Q9Y2P8 373 aaKnown RBP5□□□□□ -1.61
USP46-208ENST00000512656 HSPG2P98160 4391 aa5□□□□□ -1.61
USP46-208ENST00000512656 A0A1W2PPQ1 181 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 FAM25EA8MYX2 175 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 GAGE7O76087 117 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 SNRPCP09234 159 aaKnown RBP4.99□□□□□ -1.61
USP46-208ENST00000512656 GAGE12FP0CL80 117 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 GAGE12GP0CL81 117 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 GAGE12IP0CL82 117 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 IGLC2P0DOY2 106 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 CAV2P51636 162 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 ARL16Q0P5N6 197 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 DAZ2Q13117 558 aaKnown RBP4.99□□□□□ -1.61
USP46-208ENST00000512656 OPCMLQ14982 345 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 NRARPQ7Z6K4 114 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 LINC00612Q8N6U2 182 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 ZNF680Q8NEM1 530 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 TMEM37Q8WXS4 190 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 MGST2Q99735 147 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 UPK3BQ9BT76 320 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 Q9H3A6 140 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 UQCC1Q9NVA1 299 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 PRELID1Q9Y255 219 aa4.99□□□□□ -1.61
USP46-208ENST00000512656 TRGV2A0A075B6R0 118 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 TRAV12-3A0A0B4J271 114 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 A0A0J9YY99 117 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 C5orf51A6NDU8 294 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 PRAC2D3DTV9 90 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 H3BQ15 152 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 H3BTX0 84 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 SLC17A3O00476 420 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 ZNF253O75346 499 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 SLC25A5P05141 298 aaKnown RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 CT45A10P0DMU9 189 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 PRB4P10163 310 aaPredicted RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 IL7P13232 177 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 S100A11P31949 105 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 RPL29P47914 159 aaKnown RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 HBG1P69891 147 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 HBG2P69892 147 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 STX12Q86Y82 276 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 MRPL53Q96EL3 112 aaKnown RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 SAT2Q96F10 170 aaPredicted RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 LINC00477Q96M19 166 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 PARD6GQ9BYG4 376 aaPredicted RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 RBM38Q9H0Z9 239 aaKnown RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 WDR83OSQ9Y284 106 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 MRPS16Q9Y3D3 137 aaKnown RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 LSM5Q9Y4Y9 91 aaKnown RBP4.98□□□□□ -1.61
USP46-208ENST00000512656 TIMM9Q9Y5J7 89 aa4.98□□□□□ -1.61
USP46-208ENST00000512656 TRBV19A0A075B6N1 114 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 C7orf71A4D174 169 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 J3KRW8 73 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 CCSO14618 274 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 MPDU1O75352 247 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 CST7O76096 145 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 HIST1H1EP10412 219 aaKnown RBP4.97□□□□□ -1.61
USP46-208ENST00000512656 BTCP35070 178 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 SULT1A1P50225 295 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 BAXQ07812 192 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 PDE6HQ13956 83 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 ATP6V1FQ16864 119 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 MORN5Q5VZ52 161 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 MIC13Q5XKP0 118 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 SPATA12Q7Z6I5 190 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 MAPKAPK5-AS1Q8N8E1 139 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 ZNF431Q8TF32 576 aaPredicted RBP4.97□□□□□ -1.61
USP46-208ENST00000512656 CHAC2Q8WUX2 184 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 C2orf50Q96LR7 162 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 C18orf15Q96N68 181 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 LINC00467Q9BRT7 94 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 AAMDCQ9H7C9 122 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 LYRM2Q9NU23 88 aaPredicted RBP4.97□□□□□ -1.61
USP46-208ENST00000512656 SLC39A9Q9NUM3 307 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 TMEM14CQ9P0S9 112 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 LRP1BQ9NZR2 4599 aa4.97□□□□□ -1.61
USP46-208ENST00000512656 TRAV5A0A0B4J249 113 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 UBE2L5PA0A1B0GUS4 154 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 FAM24AA6NFZ4 105 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 LYRM1O43325 122 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 TCRBP04435 133 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 GPX1P07203 203 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 NMBP08949 121 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 FGF7P21781 194 aa4.96□□□□□ -1.62
USP46-208ENST00000512656 S100A10P60903 97 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms