RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 CD28P10747 220 aa18.38■□□□□ 0.53
SPOCK3-221ENST00000512648 RPL11P62913 178 aaKnown RBP18.38■□□□□ 0.53
SPOCK3-221ENST00000512648 FHL3Q13643 280 aa18.38■□□□□ 0.53
SPOCK3-221ENST00000512648 COX19Q49B96 90 aa18.38■□□□□ 0.53
SPOCK3-221ENST00000512648 C20orf173Q96LM9 149 aa18.38■□□□□ 0.53
SPOCK3-221ENST00000512648 LINC00477Q96M19 166 aa18.38■□□□□ 0.53
SPOCK3-221ENST00000512648 EDN2P20800 178 aa18.37■□□□□ 0.53
SPOCK3-221ENST00000512648 CRIP1P50238 77 aa18.37■□□□□ 0.53
SPOCK3-221ENST00000512648 SLURP1P55000 103 aa18.37■□□□□ 0.53
SPOCK3-221ENST00000512648 RNF114Q9Y508 228 aa18.37■□□□□ 0.53
SPOCK3-221ENST00000512648 IZUMO1RA6ND01 250 aa18.36■□□□□ 0.53
SPOCK3-221ENST00000512648 ZNF138P52744 262 aa18.36■□□□□ 0.53
SPOCK3-221ENST00000512648 FOXA3P55318 350 aaPredicted RBP18.36■□□□□ 0.53
SPOCK3-221ENST00000512648 DEFB136Q30KP8 78 aa18.36■□□□□ 0.53
SPOCK3-221ENST00000512648 KHDC1LQ5JSQ8 128 aa18.36■□□□□ 0.53
SPOCK3-221ENST00000512648 OR9G4Q8NGQ1 327 aa18.36■□□□□ 0.53
SPOCK3-221ENST00000512648 OTOGQ6ZRI0 2925 aa18.36■□□□□ 0.53
SPOCK3-221ENST00000512648 TRBV7-9A0A0J9YWB2 115 aa18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 TRGC2P03986 189 aa18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 SRSF2Q01130 221 aaKnown RBP18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 TMEM78Q5T7P6 136 aa18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 ADAMTSL5Q6ZMM2 481 aa18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 Q71RC1 249 aaPredicted RBP18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 ZNF738Q8NE65 137 aa18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 C8orf49Q96NF6 230 aa18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 NAT8BQ9UHF3 227 aa18.35■□□□□ 0.53
SPOCK3-221ENST00000512648 LOC105371267A0A1B0GV96 52 aa18.34■□□□□ 0.53
SPOCK3-221ENST00000512648 ERCC8Q13216 396 aa18.34■□□□□ 0.53
SPOCK3-221ENST00000512648 SMUG1Q53HV7 270 aa18.34■□□□□ 0.53
SPOCK3-221ENST00000512648 FAM162BQ5T6X4 162 aa18.34■□□□□ 0.53
SPOCK3-221ENST00000512648 RASL11AQ6T310 242 aa18.34■□□□□ 0.53
SPOCK3-221ENST00000512648 MS4A6AQ9H2W1 248 aa18.34■□□□□ 0.53
SPOCK3-221ENST00000512648 TRAV2A0A0B4J234 112 aa18.33■□□□□ 0.53
SPOCK3-221ENST00000512648 K7EQG2 157 aa18.33■□□□□ 0.53
SPOCK3-221ENST00000512648 DLX4Q92988 240 aaPredicted RBP18.33■□□□□ 0.53
SPOCK3-221ENST00000512648 RAX2Q96IS3 184 aa18.33■□□□□ 0.53
SPOCK3-221ENST00000512648 CITED2Q99967 270 aaPredicted RBP18.33■□□□□ 0.53
SPOCK3-221ENST00000512648 SAV1Q9H4B6 383 aaPredicted RBP18.33■□□□□ 0.53
SPOCK3-221ENST00000512648 A0A1B0GUS0 222 aa18.33■□□□□ 0.52
SPOCK3-221ENST00000512648 CA1P00915 261 aaPredicted RBP18.32■□□□□ 0.52
SPOCK3-221ENST00000512648 CSN3P07498 182 aa18.32■□□□□ 0.52
SPOCK3-221ENST00000512648 ACTL10Q5JWF8 245 aa18.32■□□□□ 0.52
SPOCK3-221ENST00000512648 OR10J6PQ8NGY7 276 aa18.32■□□□□ 0.52
SPOCK3-221ENST00000512648 NEU1Q99519 415 aa18.32■□□□□ 0.52
SPOCK3-221ENST00000512648 GNB1LQ9BYB4 327 aa18.32■□□□□ 0.52
SPOCK3-221ENST00000512648 CCL24O00175 119 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 PAFAH1B2P68402 229 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 NUP35Q8NFH5 326 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 OR2D3Q8NGH3 330 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 Q8TAT8 98 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 ASCL2Q99929 193 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 GPR61Q9BZJ8 451 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 SIGLEC8Q9NYZ4 499 aa18.31■□□□□ 0.52
SPOCK3-221ENST00000512648 FABP5P3A8MUU1 101 aa18.3■□□□□ 0.52
SPOCK3-221ENST00000512648 WDR73Q6P4I2 378 aa18.3■□□□□ 0.52
SPOCK3-221ENST00000512648 ATP5L2Q7Z4Y8 100 aa18.3■□□□□ 0.52
SPOCK3-221ENST00000512648 ZFP82Q8N141 532 aa18.3■□□□□ 0.52
SPOCK3-221ENST00000512648 OR8A1Q8NGG7 326 aa18.3■□□□□ 0.52
SPOCK3-221ENST00000512648 SH2D1AO60880 128 aa18.29■□□□□ 0.52
SPOCK3-221ENST00000512648 PRB4P10163 310 aaPredicted RBP18.29■□□□□ 0.52
SPOCK3-221ENST00000512648 HIGD1CA8MV81 97 aa18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 HAX1O00165 279 aa18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 MT-ND6P03923 174 aa18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 TCL1AP56279 114 aa18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 RPS20P60866 119 aaKnown RBP18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 SNRPD3P62318 126 aaKnown RBP18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 Q6AWC8 147 aa18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 FRZBQ92765 325 aa18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 FAM19A4Q96LR4 140 aa18.28■□□□□ 0.52
SPOCK3-221ENST00000512648 XKRY2A2RUG3 117 aa18.27■□□□□ 0.52
SPOCK3-221ENST00000512648 ZNF80P51504 273 aaPredicted RBP18.27■□□□□ 0.52
SPOCK3-221ENST00000512648 HIST1H1AQ02539 215 aaPredicted RBP18.27■□□□□ 0.52
SPOCK3-221ENST00000512648 RBPMS2Q6ZRY4 209 aaKnown RBP18.27■□□□□ 0.52
SPOCK3-221ENST00000512648 GTSF1Q8WW33 167 aa18.27■□□□□ 0.52
SPOCK3-221ENST00000512648 DUX3Q96PT4 197 aa18.27■□□□□ 0.52
SPOCK3-221ENST00000512648 TRAPPC1Q9Y5R8 145 aa18.27■□□□□ 0.52
SPOCK3-221ENST00000512648 IGKV3-7A0A075B6H7 116 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BKO60814 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BJP06899 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BOP23527 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BBP33778 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BDP58876 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BCP62807 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST2H2BEQ16778 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BHQ93079 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BNQ99877 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 HIST1H2BMQ99879 126 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 ADARB2-AS1A8MUL3 147 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 TRGC1P0CF51 173 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 APRG1Q8IVJ8 170 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 C11orf44Q8N8P7 122 aa18.26■□□□□ 0.51
SPOCK3-221ENST00000512648 TRAV25A0A0B4J276 109 aa18.25■□□□□ 0.51
SPOCK3-221ENST00000512648 TMEM189A5PLL7 270 aa18.25■□□□□ 0.51
SPOCK3-221ENST00000512648 C5orf52A6NGY3 159 aa18.25■□□□□ 0.51
SPOCK3-221ENST00000512648 S100A6P06703 90 aa18.25■□□□□ 0.51
SPOCK3-221ENST00000512648 DEFB114Q30KQ6 69 aa18.25■□□□□ 0.51
SPOCK3-221ENST00000512648 A0A1B0GXF2 115 aa18.24■□□□□ 0.51
SPOCK3-221ENST00000512648 CRISP2P16562 243 aa18.24■□□□□ 0.51
SPOCK3-221ENST00000512648 FABP9Q0Z7S8 132 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms