RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 ZNF546Q86UE3 836 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 DYNC2LI1Q8TCX1 351 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 RAB2BQ8WUD1 216 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 SAT2Q96F10 170 aaPredicted RBP8.36□□□□□ -1.07
DDX41-215ENST00000512431 TM2D2Q9BX73 214 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 SLC25A31Q9H0C2 315 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 TP53TG3Q9ULZ0 132 aa8.36□□□□□ -1.07
DDX41-215ENST00000512431 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
DDX41-215ENST00000512431 IGHV1OR15-1A0A075B7D0 117 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 FNDC10F2Z333 226 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 H3BQ15 152 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 CTDSPLO15194 276 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 RS1O15537 224 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 OR4E1P0C645 316 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 SFTA3P0C7M3 94 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 TNFSF8P32971 234 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 POLR2GP62487 172 aaKnown RBP eCLIP8.35□□□□□ -1.07
DDX41-215ENST00000512431 ERCC8Q13216 396 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 IL18Q14116 193 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 C10orf113Q5VZT2 155 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 OR10P1Q8NGE3 313 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 BLNKQ8WV28 456 aa8.35□□□□□ -1.07
DDX41-215ENST00000512431 MRPL53Q96EL3 112 aaKnown RBP8.35□□□□□ -1.07
DDX41-215ENST00000512431 CCDC59Q9P031 241 aaKnown RBP8.35□□□□□ -1.07
DDX41-215ENST00000512431 RABL2AQ9UBK7 228 aaPredicted RBP8.35□□□□□ -1.07
DDX41-215ENST00000512431 HOXB5P09067 269 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 ASAH1Q13510 395 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 OPCMLQ14982 345 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 NHLRC2Q8NBF2 726 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 OR10G4Q8NGN3 311 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 ZNF479Q96JC4 524 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 BCL7BQ9BQE9 202 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 MIXL1Q9H2W2 232 aa8.34□□□□□ -1.07
DDX41-215ENST00000512431 AGPAT2O15120 278 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 ZNF253O75346 499 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 NMBP08949 121 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 TIRAPP58753 221 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 ACOT6Q3I5F7 207 aaPredicted RBP8.33□□□□□ -1.08
DDX41-215ENST00000512431 OR10J3Q5JRS4 329 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 MORN5Q5VZ52 161 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 Q6ZRG5 221 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 SRRQ9GZT4 340 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 RSL24D1Q9UHA3 163 aaKnown RBP8.33□□□□□ -1.08
DDX41-215ENST00000512431 PRELID1Q9Y255 219 aa8.33□□□□□ -1.08
DDX41-215ENST00000512431 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.32□□□□□ -1.08
DDX41-215ENST00000512431 CCDC160A6NGH7 325 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 A6NHS1 94 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 METTL15P1P0C7V9 234 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 CRISP2P16562 243 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 FAUP35544 74 aaKnown RBP8.32□□□□□ -1.08
DDX41-215ENST00000512431 ID3Q02535 119 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 TMEM78Q5T7P6 136 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 TMEM37Q8WXS4 190 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 DIRAS2Q96HU8 199 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 SMIM8Q96KF7 97 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 CHAC1Q9BUX1 264 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 SLIRPQ9GZT3 109 aaKnown RBP8.32□□□□□ -1.08
DDX41-215ENST00000512431 AGPAT4-IT1Q9H0P7 198 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 DNAJC4Q9NNZ3 241 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
DDX41-215ENST00000512431 M0R3E3 92 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 CTDSP2O14595 271 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 SSSCA1O60232 199 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 SFT2D2O95562 160 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 HIST1H1EP10412 219 aaKnown RBP8.31□□□□□ -1.08
DDX41-215ENST00000512431 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
DDX41-215ENST00000512431 LAGE3Q14657 143 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 RASL10AQ92737 203 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 SPXQ9BT56 116 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 TIMM9Q9Y5J7 89 aa8.31□□□□□ -1.08
DDX41-215ENST00000512431 FAT3Q8TDW7 4589 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 RBFOX3A6NFN3 312 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 LECT2O14960 151 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 NOL3O60936 208 aaKnown RBP8.3□□□□□ -1.08
DDX41-215ENST00000512431 CCNKO75909 580 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 PFN1P07737 140 aaKnown RBP8.3□□□□□ -1.08
DDX41-215ENST00000512431 RAB31Q13636 194 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 ZNF846Q147U1 533 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 C9orf47Q6ZRZ4 202 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 C12orf45Q8N5I9 185 aaPredicted RBP8.3□□□□□ -1.08
DDX41-215ENST00000512431 OR4C5Q8NGB2 326 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 OR1L4Q8NGR5 311 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 AAMDCQ9H7C9 122 aa8.3□□□□□ -1.08
DDX41-215ENST00000512431 TRBV19A0A075B6N1 114 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 LOC100131303A0A0U1RQF7 123 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 FABP12A6NFH5 140 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 WFDC2Q14508 124 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 LINC01620Q4KN68 170 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 TMEM14EPQ6UXP3 125 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 CIRBP-AS1Q8TBR5 109 aa8.29□□□□□ -1.08
DDX41-215ENST00000512431 PFDN5Q99471 154 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms