RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ODF3Q96PU9 254 aa9.38□□□□□ -0.91
RNF4-215ENST00000511843 HMGB3O15347 200 aaKnown RBP9.37□□□□□ -0.91
RNF4-215ENST00000511843 RNASE4P34096 147 aaKnown RBP9.37□□□□□ -0.91
RNF4-215ENST00000511843 KHDC3LQ587J8 217 aa9.37□□□□□ -0.91
RNF4-215ENST00000511843 HSD17B11Q8NBQ5 300 aa9.37□□□□□ -0.91
RNF4-215ENST00000511843 FAM19A4Q96LR4 140 aa9.37□□□□□ -0.91
RNF4-215ENST00000511843 C20orf144Q9BQM9 153 aa9.37□□□□□ -0.91
RNF4-215ENST00000511843 Q9H3A6 140 aa9.37□□□□□ -0.91
RNF4-215ENST00000511843 TIMM8BQ9Y5J9 83 aaPredicted RBP9.37□□□□□ -0.91
RNF4-215ENST00000511843 C7orf71A4D174 169 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 F5H768 121 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 P0DMU3 169 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 FAM231AP0DMU4 169 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 FAM231CP0DMU5 169 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 POM121L12Q8N7R1 296 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 LINC00477Q96M19 166 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 DNAH10Q8IVF4 4471 aa9.36□□□□□ -0.91
RNF4-215ENST00000511843 KLLNB2CW77 178 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 M0R2N4 97 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
RNF4-215ENST00000511843 GIPP09681 153 aaPredicted RBP9.35□□□□□ -0.91
RNF4-215ENST00000511843 M6PRP20645 277 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 ACOT6Q3I5F7 207 aaPredicted RBP9.35□□□□□ -0.91
RNF4-215ENST00000511843 TMEM78Q5T7P6 136 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 UBE2DNLQ8IWF7 75 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 CCDC28AQ8IWP9 274 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 FAM210BQ96KR6 192 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 AQP10Q96PS8 301 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 RPH3ALQ9UNE2 315 aa9.35□□□□□ -0.91
RNF4-215ENST00000511843 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 FXYD6-FXYD2A0A087WZ82 144 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 GAGE12BA1L429 117 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 CBY3A6NI87 242 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 ZNF324O75467 553 aaPredicted RBP9.34□□□□□ -0.91
RNF4-215ENST00000511843 GAGE7O76087 117 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 ATP5G1P05496 136 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 GPX1P07203 203 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 GAGE12FP0CL80 117 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 GAGE12GP0CL81 117 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 GAGE12IP0CL82 117 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 ATP5G3P48201 142 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 TAS2R45P59539 299 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 RGS21Q2M5E4 152 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 OR10G4Q8NGN3 311 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 OR10G9Q8NGN4 311 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 OR10G7Q8NGN6 311 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 HYLS1Q96M11 299 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 PYGO2Q9BRQ0 406 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 ZNF492Q9P255 531 aa9.34□□□□□ -0.91
RNF4-215ENST00000511843 A0A1W2PPV4 95 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 SNURFLB1AK76 121 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 CRISP2P16562 243 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 ATP6V0CP27449 155 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 ZNF138P52744 262 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 Q6ZTI0 123 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 GSN-AS1Q9NRJ2 163 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 TP53TG3Q9ULZ0 132 aa9.33□□□□□ -0.92
RNF4-215ENST00000511843 RNF222A6NCQ9 220 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 PGPA6NDG6 321 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 NUDT3O95989 172 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 ARL14EPLP0DKL9 152 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 CSN1S1P47710 185 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 GNG5P63218 68 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 LINC00612Q8N6U2 182 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 C11orf72Q8NBR9 251 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 OR2T35Q8NGX2 323 aa9.32□□□□□ -0.92
RNF4-215ENST00000511843 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 G3V3Q6 166 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 SMLR1H3BR10 107 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 HOXA5P20719 270 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 CDC34P49427 236 aaPredicted RBP9.31□□□□□ -0.92
RNF4-215ENST00000511843 ZNF266Q14584 549 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 MUC21Q5SSG8 566 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 RPL7L1Q6DKI1 246 aaKnown RBP9.31□□□□□ -0.92
RNF4-215ENST00000511843 LYPD1Q8N2G4 141 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 EIF4E3Q8N5X7 224 aaKnown RBP9.31□□□□□ -0.92
RNF4-215ENST00000511843 TMPRSS5Q9H3S3 457 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 OTORQ9NRC9 128 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 TNFSF18Q9UNG2 199 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 KLF12Q9Y4X4 402 aa9.31□□□□□ -0.92
RNF4-215ENST00000511843 A0A0J9YY99 117 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 RBAKDNA6NC62 111 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 RGS13O14921 159 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 OR5I1Q13606 314 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 PQLC2Q6ZP29 291 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 SSX7Q7RTT5 188 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 C15orf53Q8NAA6 179 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 INO80EQ8NBZ0 244 aaPredicted RBP9.3□□□□□ -0.92
RNF4-215ENST00000511843 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
RNF4-215ENST00000511843 TRAV26-1A0A087WT03 109 aa9.29□□□□□ -0.92
RNF4-215ENST00000511843 TRGV1A0A0A0MS02 117 aa9.29□□□□□ -0.92
RNF4-215ENST00000511843 TRAV8-1A0A0A6YYK1 113 aa9.29□□□□□ -0.92
RNF4-215ENST00000511843 NMBP08949 121 aa9.29□□□□□ -0.92
RNF4-215ENST00000511843 DAZ2Q13117 558 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms