RNA–Protein interactions for RNA: ENST00000511105.1

PTPN13-208, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-208ENST00000511105 IL4P05112 153 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 SULT1A3P0DMM9 295 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 SULT1A4P0DMN0 295 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 OR10J1P30954 320 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 INPP1P49441 399 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 RRAS2P62070 204 aaPredicted RBP3.34□□□□□ -1.87
PTPN13-208ENST00000511105 DHRS2Q13268 280 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 USF2Q15853 346 aaPredicted RBP3.34□□□□□ -1.87
PTPN13-208ENST00000511105 ACTL10Q5JWF8 245 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 Q6ZN92 141 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 HSD17B13Q7Z5P4 300 aaPredicted RBP3.34□□□□□ -1.87
PTPN13-208ENST00000511105 LYG2Q86SG7 212 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 LGI3Q8N145 548 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 DTD1Q8TEA8 209 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 Q8WTZ3 238 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 C15orf40Q8WUR7 153 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 PRRT1Q99946 306 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 PAXXQ9BUH6 204 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 Q9H3A6 140 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 GSKIPQ9P0R6 139 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 TMEM56-RWDD3S4R434 201 aa3.34□□□□□ -1.87
PTPN13-208ENST00000511105 CSMD3Q7Z407 3707 aa3.34□□□□□ -1.88
PTPN13-208ENST00000511105 OR4C46A6NHA9 309 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 ZFP92A6NM28 416 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 F6UB75 175 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 PPP1R2P9O14990 202 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 LY6G6CO95867 125 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 IGLC1P0CG04 106 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 ZNF705DP0CH99 300 aaPredicted RBP3.33□□□□□ -1.88
PTPN13-208ENST00000511105 ZNF705BP0CI00 300 aaPredicted RBP3.33□□□□□ -1.88
PTPN13-208ENST00000511105 RD3LP0DJH9 198 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 MT3P25713 68 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 NPY1RP25929 384 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 HTR2BP41595 481 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 EMP1P54849 157 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 LYZP61626 148 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 POLR2GP62487 172 aaKnown RBP eCLIP3.33□□□□□ -1.88
PTPN13-208ENST00000511105 MRPS10P82664 201 aaKnown RBP3.33□□□□□ -1.88
PTPN13-208ENST00000511105 SMCO1Q147U7 214 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 C2orf83Q53S99 150 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 PSMG4Q5JS54 123 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 SPANXN5Q5MJ07 72 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 GDF5OSQ5U4N7 250 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 THOC7Q6I9Y2 204 aaKnown RBP3.33□□□□□ -1.88
PTPN13-208ENST00000511105 POM121L12Q8N7R1 296 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 OR11H2Q8NH07 326 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 OR4X1Q8NH49 305 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 MARC2Q969Z3 335 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 PPP1R14BQ96C90 147 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 GALNT14Q96FL9 552 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 VSIG2Q96IQ7 327 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 OR10C1Q96KK4 312 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 SCGB3A2Q96PL1 93 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 METTL26Q96S19 204 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 RARRES2Q99969 163 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 SEC22CQ9BRL7 303 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 SCRT1Q9BWW7 348 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 SRRQ9GZT4 340 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 VSIRQ9H7M9 311 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 DOK5Q9P104 306 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 TENM3Q9P273 2699 aa3.33□□□□□ -1.88
PTPN13-208ENST00000511105 LYSTQ99698 3801 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 IGKV1D-37A0A075B6S9 117 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 A0A0B4J2A0 478 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 LCE6AA0A183 80 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 C9orf170A2RU37 121 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 LYRM9A8MSI8 78 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 PLA2G10O15496 165 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 DEDDO75618 318 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 EIF3GO75821 320 aaKnown RBP eCLIP3.32□□□□□ -1.88
PTPN13-208ENST00000511105 RBMY1A1P0DJD3 496 aaKnown RBP3.32□□□□□ -1.88
PTPN13-208ENST00000511105 ORM2P19652 201 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 HLA-DMBP28068 263 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 SELENOTP62341 195 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 PAFAH1B2P68402 229 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 SSBP1Q04837 148 aaKnown RBP3.32□□□□□ -1.88
PTPN13-208ENST00000511105 SURF2Q15527 256 aaPredicted RBP3.32□□□□□ -1.88
PTPN13-208ENST00000511105 BSXQ3C1V8 233 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 NMSQ5H8A3 153 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 TRIQKQ629K1 86 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 OR4B1Q8NGF8 309 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 SLC35E1Q96K37 410 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 GINS3Q9BRX5 216 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 SLC25A22Q9H936 323 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 PSENENQ9NZ42 101 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 XCL2Q9UBD3 114 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 SHPKQ9UHJ6 478 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 LSM5Q9Y4Y9 91 aaKnown RBP3.32□□□□□ -1.88
PTPN13-208ENST00000511105 AGRNO00468 2067 aa3.32□□□□□ -1.88
PTPN13-208ENST00000511105 IGKV1OR2-108A0A075B7D4 117 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 TRAV30A0A087WSZ9 112 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 FAM24AA6NFZ4 105 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 AGPAT2O15120 278 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 SYNGR2O43760 224 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 SSSCA1O60232 199 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 PITX3O75364 302 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 SIX6O95475 246 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 HBE1P02100 147 aa3.31□□□□□ -1.88
PTPN13-208ENST00000511105 GIG44P09565 113 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms