RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 COX11Q9Y6N1 276 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 IGHV3OR16-8A0A075B7F1 116 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 HBDP02042 147 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 ATP5G2Q06055 141 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 C12orf54Q6X4T0 127 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 C5orf56Q8N8D9 126 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 CCDC140Q96MF4 163 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
AP003555.1-202ENST00000511013 CLPSL1A2RUU4 121 aa10.99□□□□□ -0.65
AP003555.1-202ENST00000511013 ERCC8Q13216 396 aa10.99□□□□□ -0.65
AP003555.1-202ENST00000511013 LGALS9BQ3B8N2 356 aa10.99□□□□□ -0.65
AP003555.1-202ENST00000511013 LGALS9CQ6DKI2 356 aa10.99□□□□□ -0.65
AP003555.1-202ENST00000511013 ITLN2Q8WWU7 325 aaPredicted RBP10.99□□□□□ -0.65
AP003555.1-202ENST00000511013 G3V318 75 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 OR8A1Q8NGG7 326 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 MOB4Q9Y3A3 225 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 A0A096LNJ9 63 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 PRAC2D3DTV9 90 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 TCF21O43680 179 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 NUDT3O95989 172 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 COX8AP10176 69 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 LY6DQ14210 128 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 FAM106AQ4KMX7 169 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 MPV17L2Q567V2 206 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 TMEM78Q5T7P6 136 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 FAM223AQ8IWN6 122 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 OR1N2Q8NGR9 330 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 MCRIP2Q9BUT9 160 aaKnown RBP10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 MAP1LC3AQ9H492 121 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 U3KQE9 123 aa10.98□□□□□ -0.65
AP003555.1-202ENST00000511013 TRAV41A0A0B4J266 112 aa10.97□□□□□ -0.65
AP003555.1-202ENST00000511013 NPYP01303 97 aa10.97□□□□□ -0.65
AP003555.1-202ENST00000511013 CRIP2P52943 208 aaPredicted RBP10.97□□□□□ -0.65
AP003555.1-202ENST00000511013 PAX8Q06710 450 aa10.97□□□□□ -0.65
AP003555.1-202ENST00000511013 LOXL1Q08397 574 aaPredicted RBP10.97□□□□□ -0.65
AP003555.1-202ENST00000511013 ZNF575Q86XF7 245 aa10.97□□□□□ -0.65
AP003555.1-202ENST00000511013 RNF182Q8N6D2 247 aa10.97□□□□□ -0.65
AP003555.1-202ENST00000511013 LINC01548A6NM66 108 aa10.96□□□□□ -0.65
AP003555.1-202ENST00000511013 NCR2O95944 276 aa10.96□□□□□ -0.65
AP003555.1-202ENST00000511013 PTTG1IPP53801 180 aa10.96□□□□□ -0.65
AP003555.1-202ENST00000511013 IL17RELQ6ZVW7 336 aa10.96□□□□□ -0.65
AP003555.1-202ENST00000511013 AGPAT4-IT1Q9H0P7 198 aa10.96□□□□□ -0.65
AP003555.1-202ENST00000511013 PPP1R14DQ9NXH3 145 aa10.96□□□□□ -0.65
AP003555.1-202ENST00000511013 IGHV3-66A0A0C4DH42 116 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 LINC01546A6NGU7 62 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 UBE2V1Q13404 147 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 BVES-AS1Q5T3Y7 98 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 C9orf47Q6ZRZ4 202 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 RNF185Q96GF1 192 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 PSMG3-AS1Q96PY0 264 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 PRORYQ9H606 182 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 NXT2Q9NPJ8 142 aaKnown RBP10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 IGHV1-69DA0A0B4J2H0 117 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 SMKR1H3BMG3 65 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 IGHV1-69P01742 117 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 C19orf54Q5BKX5 351 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 PSMG4Q5JS54 123 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 C8orf86Q6ZUL3 223 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 SMIM15Q7Z3B0 74 aa10.95□□□□□ -0.66
AP003555.1-202ENST00000511013 SPTBN4Q9H254 2564 aa10.94□□□□□ -0.66
AP003555.1-202ENST00000511013 TRAV8-2A0A0B4J237 113 aa10.94□□□□□ -0.66
AP003555.1-202ENST00000511013 MSRB1Q9NZV6 116 aa10.94□□□□□ -0.66
AP003555.1-202ENST00000511013 CACNA1BQ00975 2339 aa10.94□□□□□ -0.66
AP003555.1-202ENST00000511013 IGHV4-39P01824 125 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 PIMREGQ9BSJ6 248 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 MEGF9Q9H1U4 602 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 LENEPQ9Y5L5 61 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 DCHS1Q96JQ0 3298 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 IGHV3OR16-13A0A075B7E8 117 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 IGHV3-74A0A0B4J1X5 117 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 C19orf84I3L1E1 186 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 ZNF207O43670 478 aaKnown RBP10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 TRGV3P03979 118 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 FCER1GP30273 86 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 PRSS57Q6UWY2 283 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 C9orf139Q6ZV77 190 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 TMEM219Q86XT9 240 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 DEFB125Q8N687 156 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 C16orf92Q96LL3 132 aa10.93□□□□□ -0.66
AP003555.1-202ENST00000511013 IGKV3D-20A0A0C4DH25 116 aa10.92□□□□□ -0.66
AP003555.1-202ENST00000511013 CD5LO43866 347 aa10.92□□□□□ -0.66
AP003555.1-202ENST00000511013 TNFRSF6BO95407 300 aa10.92□□□□□ -0.66
AP003555.1-202ENST00000511013 BRI3O95415 125 aa10.92□□□□□ -0.66
AP003555.1-202ENST00000511013 GNLYP22749 145 aa10.92□□□□□ -0.66
AP003555.1-202ENST00000511013 ARL3P36405 182 aa10.92□□□□□ -0.66
AP003555.1-202ENST00000511013 CACNG7P62955 275 aa10.92□□□□□ -0.66
AP003555.1-202ENST00000511013 IGHV3-49A0A0A0MS15 119 aa10.91□□□□□ -0.66
AP003555.1-202ENST00000511013 H3BUA1 57 aa10.91□□□□□ -0.66
AP003555.1-202ENST00000511013 CCL25O15444 150 aa10.91□□□□□ -0.66
AP003555.1-202ENST00000511013 PIFOQ8TCI5 191 aa10.91□□□□□ -0.66
AP003555.1-202ENST00000511013 GLMPQ8WWB7 406 aa10.91□□□□□ -0.66
AP003555.1-202ENST00000511013 TP73-AS1Q9UF72 201 aa10.91□□□□□ -0.66
AP003555.1-202ENST00000511013 NDUFA4O00483 81 aa10.9□□□□□ -0.66
AP003555.1-202ENST00000511013 IGF1P05019 195 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms