RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 SNHG12Q9BXW3 62 aa12.76□□□□□ -0.37
CLMAT3-201ENST00000510576 DSCR9P59020 149 aa12.75□□□□□ -0.37
CLMAT3-201ENST00000510576 MRPL53Q96EL3 112 aaKnown RBP12.75□□□□□ -0.37
CLMAT3-201ENST00000510576 FABP5P3A8MUU1 101 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 B4DSR2 109 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 H3BUA1 57 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 M0QZK8 103 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 IGHG2P01859 326 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 C8orf86Q6ZUL3 223 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 MRPL52Q86TS9 123 aaKnown RBP12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 FER1L6-AS1Q8NA97 138 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 TMEM70Q9BUB7 260 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 ZMAT5Q9UDW3 170 aaKnown RBP12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 UTP20O75691 2785 aaKnown RBP12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 TMEM213A2RRL7 107 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 CSN3P07498 182 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 HIF1ANQ9NWT6 349 aa12.74□□□□□ -0.37
CLMAT3-201ENST00000510576 TRAV8-2A0A0B4J237 113 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 LEPROTL1O95214 131 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 BRI3O95415 125 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 ORM1P02763 201 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 OR5AL1P0C617 328 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 ZNF138P52744 262 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 SSTP61278 116 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 DOPEY1Q5JWR5 2465 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 ATOH7Q8N100 152 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 SPTAN1Q13813 2472 aaKnown RBP12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 SVEP1Q4LDE5 3571 aa12.73□□□□□ -0.37
CLMAT3-201ENST00000510576 IGLC6P0CF74 106 aa12.72□□□□□ -0.37
CLMAT3-201ENST00000510576 FAM104BQ5XKR9 115 aa12.72□□□□□ -0.37
CLMAT3-201ENST00000510576 IL17RELQ6ZVW7 336 aa12.72□□□□□ -0.37
CLMAT3-201ENST00000510576 KLHDC1Q8N7A1 406 aa12.72□□□□□ -0.37
CLMAT3-201ENST00000510576 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
CLMAT3-201ENST00000510576 HELZ2Q9BYK8 2649 aaKnown RBP12.72□□□□□ -0.37
CLMAT3-201ENST00000510576 PPIFP30405 207 aaKnown RBP12.72□□□□□ -0.37
CLMAT3-201ENST00000510576 NDUFA4O00483 81 aa12.71□□□□□ -0.37
CLMAT3-201ENST00000510576 GATA3P23771 443 aa12.71□□□□□ -0.37
CLMAT3-201ENST00000510576 TMEM78Q5T7P6 136 aa12.71□□□□□ -0.37
CLMAT3-201ENST00000510576 FA2HQ7L5A8 372 aa12.71□□□□□ -0.37
CLMAT3-201ENST00000510576 GLMPQ8WWB7 406 aa12.71□□□□□ -0.37
CLMAT3-201ENST00000510576 UQCR10Q9UDW1 63 aa12.71□□□□□ -0.37
CLMAT3-201ENST00000510576 LRRK2Q5S007 2527 aa12.71□□□□□ -0.38
CLMAT3-201ENST00000510576 TRAV9-2A0A087WT02 112 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 MUC21A0A0G2JKD1 596 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 MUC21A0A140T8X8 626 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 D6R8Y8 96 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 TRBV12-3P01733 135 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 SLC25A16P16260 332 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 TWIST1Q15672 202 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 MUC21Q5SSG8 566 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 AMN1Q8IY45 258 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 PRSS3P2Q8NHM4 247 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 NRGNQ92686 78 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 C16orf92Q96LL3 132 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 AGPAT4-IT1Q9H0P7 198 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 AP5S1Q9NUS5 200 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 U3KQK5 164 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 C20orf202A1L168 122 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 IGLC3P0DOY3 106 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 PF4V1P10720 104 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 LINC00173Q6ZV60 143 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 SPATA12Q7Z6I5 190 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 LINC00469Q8N7U9 141 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 HSPB8Q9UJY1 196 aa12.7□□□□□ -0.38
CLMAT3-201ENST00000510576 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 CRXO43186 299 aaPredicted RBP12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 AVPP01185 164 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 BLCAPP62952 87 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 HIST1H1AQ02539 215 aaPredicted RBP12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 C9orf139Q6ZV77 190 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 PRELID3AQ96N28 172 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 SRSF1Q07955 248 aaKnown RBP eCLIP12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 MRPL51Q4U2R6 128 aaKnown RBP12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 UNQ9165/PRO28630Q6UXU0 137 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 MAP1LC3CQ9BXW4 147 aa12.69□□□□□ -0.38
CLMAT3-201ENST00000510576 GCN1Q92616 2671 aaKnown RBP12.68□□□□□ -0.38
CLMAT3-201ENST00000510576 IGHV3-11P01762 117 aa12.68□□□□□ -0.38
CLMAT3-201ENST00000510576 NUTF2P61970 127 aaKnown RBP12.68□□□□□ -0.38
CLMAT3-201ENST00000510576 MAJINQ3KP22 176 aa12.68□□□□□ -0.38
CLMAT3-201ENST00000510576 C9orf47Q6ZRZ4 202 aa12.68□□□□□ -0.38
CLMAT3-201ENST00000510576 ZNF575Q86XF7 245 aa12.68□□□□□ -0.38
CLMAT3-201ENST00000510576 SMAD7O15105 426 aaKnown RBP12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 OR4X2Q8NGF9 303 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 KLK15Q9H2R5 256 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 VPS13CQ709C8 3753 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 A0A0G2JLM5 398 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 OR4C46A6NHA9 309 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 PLA2G2AP14555 144 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 COX6B1P14854 86 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 Q6ZN92 141 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 Q6ZS46 218 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 LINC01356Q8N9X3 169 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 PSMG3-AS1Q96PY0 264 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 CNFNQ9BYD5 112 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 TMEM191AQ9H0A3 160 aa12.67□□□□□ -0.38
CLMAT3-201ENST00000510576 IFI27P40305 119 aaPredicted RBP12.66□□□□□ -0.38
CLMAT3-201ENST00000510576 PET117Q6UWS5 81 aa12.66□□□□□ -0.38
CLMAT3-201ENST00000510576 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms