RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 SCRT1Q9BWW7 348 aa2.86□□□□□ -1.95
USP53-205ENST00000509769 HCSTQ9UBK5 93 aa2.86□□□□□ -1.95
USP53-205ENST00000509769 ADAMTS20P59510 1910 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 BPY2O14599 106 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 MIFP14174 115 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 UBE2D1P51668 147 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 LOXL1Q08397 574 aaPredicted RBP2.85□□□□□ -1.95
USP53-205ENST00000509769 DAZ2Q13117 558 aaKnown RBP2.85□□□□□ -1.95
USP53-205ENST00000509769 FOXE3Q13461 319 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 ZNF672Q499Z4 452 aaPredicted RBP2.85□□□□□ -1.95
USP53-205ENST00000509769 PIP4P1Q86T03 277 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 ZNF625Q96I27 306 aaPredicted RBP2.85□□□□□ -1.95
USP53-205ENST00000509769 FGF22Q9HCT0 170 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 C14orf132Q9NPU4 83 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 PATJQ8NI35 1801 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 A0A0U1RRA0 63 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 K7EN84 100 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 C15orf32Q32M92 178 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.85□□□□□ -1.95
USP53-205ENST00000509769 HRCT1Q6UXD1 115 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 TMEM61Q8N0U2 210 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 Q8N976 141 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 CFHR4Q92496 578 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 CCL17Q92583 94 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 PLPPR2Q96GM1 343 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 TRAV26-2A0A0B4J265 109 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 TRBV7-7A0A0K0K1E9 115 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 TRGV3P03979 118 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 PRR31Q5SQ13 230 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 CLEC19AQ6UXS0 136 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 IGKV3D-7A0A0C4DH55 119 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 MBD3L4A6NDZ8 208 aaPredicted RBP2.85□□□□□ -1.95
USP53-205ENST00000509769 MBD3L3A6NE82 208 aaPredicted RBP2.85□□□□□ -1.95
USP53-205ENST00000509769 C16orf97H3BN30 126 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 CCL21O00585 134 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 IGHV3-9P01782 118 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 ATP5J2P56134 94 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 LINC01465Q8N7H1 131 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 MPLKIPQ8TAP9 179 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 CYP4F30PQ9H0H9 118 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 KLK9Q9UKQ9 250 aa2.85□□□□□ -1.95
USP53-205ENST00000509769 IGHV3-15A0A0B4J1V0 119 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 SPTY2D1-AS1A0A0U1RR47 76 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 H3BPC8 53 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.84□□□□□ -1.95
USP53-205ENST00000509769 J3QLI3 93 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 MIAQ16674 131 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 KIR2DL5BQ8NHK3 375 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 Q8TCH9 128 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 RETNLBQ9BQ08 111 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 DEFB127Q9H1M4 99 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 IGLV3-32A0A0A0MS00 114 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 hDV103S1A0JD37 113 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 SHISA3A0PJX4 238 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 H7C423 109 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 K7ERJ3 54 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 ARMS2P0C7Q2 107 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 CFAP126Q5VTH2 177 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 SPATA3Q8NHX4 192 aa2.84□□□□□ -1.95
USP53-205ENST00000509769 A0A0J9YX75 114 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 H3BUA1 57 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 ZNF561-AS1K7EIQ3 104 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 NHLRC4P0CG21 123 aaPredicted RBP2.84□□□□□ -1.96
USP53-205ENST00000509769 HTN1P15515 57 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 MDFICQ9P1T7 246 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 IGHV1-45A0A0A0MS14 117 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 TRIAP1O43715 76 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 FXYD2P54710 66 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 C9orf85Q96MD7 179 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 GFI1Q99684 422 aa2.84□□□□□ -1.96
USP53-205ENST00000509769 LOC101059948A0A1B0GTJ6 334 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 CTRLP40313 264 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 PRSS12P56730 875 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 SCXQ7RTU7 201 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 MBD3L2Q8NHZ7 208 aaPredicted RBP2.83□□□□□ -1.96
USP53-205ENST00000509769 C4orf3Q8WVX3 66 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 CLEC2BQ92478 149 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 DIRC1Q969H9 104 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 DPH3Q96FX2 82 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 SND1-IT1Q9HBX3 110 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 E9PLN8 166 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 ESRGQ1W209 222 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 Q8N9L7 120 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 WFDC12Q8WWY7 111 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 ZMAT4Q9H898 229 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 CELA1Q9UNI1 258 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 IGKV3D-11A0A0A0MRZ8 115 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 IGKV3OR2-268A0A0C4DH90 116 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 SPAARA0A1B0GVQ0 90 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 IGKV3-11P04433 115 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 SPAG11BQ08648 103 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 C8orf49Q96NF6 230 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 WFDC10AQ9H1F0 79 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 KIAA1671Q9BY89 1806 aa2.83□□□□□ -1.96
USP53-205ENST00000509769 C5orf63A6NC05 138 aa2.82□□□□□ -1.96
USP53-205ENST00000509769 H3BRN7 92 aa2.82□□□□□ -1.96
USP53-205ENST00000509769 CT62P0C5K7 136 aa2.82□□□□□ -1.96
USP53-205ENST00000509769 QRFPP83859 136 aa2.82□□□□□ -1.96
USP53-205ENST00000509769 PRR25Q96S07 402 aa2.82□□□□□ -1.96
USP53-205ENST00000509769 CCL13Q99616 98 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms