RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 ATG101Q9BSB4 218 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 SLC35B3Q9H1N7 401 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 ZMAT4Q9H898 229 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 XCL2Q9UBD3 114 aa10.89□□□□□ -0.67
RNF4-213ENST00000509388 PEX7O00628 323 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 CT45A10P0DMU9 189 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 LEPP41159 167 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 ZNF138P52744 262 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 SPINK13Q1W4C9 94 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 Q6ZWC4 215 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 ZNF767PQ75MW2 155 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 CYB561D1Q8N8Q1 229 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 SPATA25Q9BR10 227 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 TXNDC17Q9BRA2 123 aa10.88□□□□□ -0.67
RNF4-213ENST00000509388 FBLL1A6NHQ2 334 aaKnown RBP10.87□□□□□ -0.67
RNF4-213ENST00000509388 A8MTW9 85 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 NHLRC4P0CG21 123 aaPredicted RBP10.87□□□□□ -0.67
RNF4-213ENST00000509388 BCL2P10415 239 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 CDKN1BP46527 198 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 PMS2P11Q13670 270 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 DEFB135Q30KP9 77 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 AMTNQ6UX39 209 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 CCDC28AQ8IWP9 274 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 LYPD6BQ8NI32 183 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 PCNPQ8WW12 178 aaKnown RBP10.87□□□□□ -0.67
RNF4-213ENST00000509388 RCHY1Q96PM5 261 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 ODF3Q96PU9 254 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 ZNF492Q9P255 531 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 VAX2Q9UIW0 290 aa10.87□□□□□ -0.67
RNF4-213ENST00000509388 J3KRW8 73 aa10.86□□□□□ -0.67
RNF4-213ENST00000509388 M0R2Z0 102 aa10.86□□□□□ -0.67
RNF4-213ENST00000509388 MEF2BQ02080 365 aaPredicted RBP10.86□□□□□ -0.67
RNF4-213ENST00000509388 Q8TAT8 98 aa10.86□□□□□ -0.67
RNF4-213ENST00000509388 SGK494Q96LW2 274 aa10.86□□□□□ -0.67
RNF4-213ENST00000509388 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 TRAV8-1A0A0A6YYK1 113 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 RBFOX3A6NFN3 312 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 SPRY2O43597 315 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 INSP01308 110 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 GPX1P07203 203 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 AKR1C3P42330 323 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 UBE2G1P62253 170 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 TMEM208Q9BTX3 173 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 EIF5A2Q9GZV4 153 aaKnown RBP10.85□□□□□ -0.67
RNF4-213ENST00000509388 PSG8Q9UQ74 426 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 GOLT1BQ9Y3E0 138 aa10.85□□□□□ -0.67
RNF4-213ENST00000509388 MEGF8Q7Z7M0 2845 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 LOC102723971A0A1B0GUV8 181 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 PDE6DO43924 150 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 NMBP08949 121 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 GIG44P09565 113 aaPredicted RBP10.84□□□□□ -0.67
RNF4-213ENST00000509388 FLI1Q01543 452 aaPredicted RBP10.84□□□□□ -0.67
RNF4-213ENST00000509388 PRNTQ86SH4 94 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 TMEM75Q8N9X5 138 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 RNF183Q96D59 192 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 IGF2BP2-AS1Q96M15 143 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 LINC00479Q96M42 142 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 TM2D3Q9BRN9 247 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 TP53TG1Q9Y2A0 90 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
RNF4-213ENST00000509388 IGHV3OR16-12A0A075B7B8 117 aa10.83□□□□□ -0.68
RNF4-213ENST00000509388 TRAV34A0A0B4J273 112 aa10.83□□□□□ -0.68
RNF4-213ENST00000509388 SCO2A0A1W2PP80 73 aa10.83□□□□□ -0.68
RNF4-213ENST00000509388 S100A9P06702 114 aaKnown RBP10.83□□□□□ -0.68
RNF4-213ENST00000509388 SAPCD1Q5SSQ6 148 aa10.83□□□□□ -0.68
RNF4-213ENST00000509388 FMC1Q96HJ9 113 aa10.83□□□□□ -0.68
RNF4-213ENST00000509388 RARRES2Q99969 163 aa10.83□□□□□ -0.68
RNF4-213ENST00000509388 TREM1Q9NP99 234 aa10.83□□□□□ -0.68
RNF4-213ENST00000509388 CRISP2P16562 243 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 RNASE4P34096 147 aaKnown RBP10.82□□□□□ -0.68
RNF4-213ENST00000509388 IFITM2Q01629 132 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 TOR2AQ5JU69 321 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 FAM19A4Q96LR4 140 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 FAM210AQ96ND0 272 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 LINC01587Q99440 93 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 NIPSNAP3BQ9BS92 247 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 RETNQ9HD89 108 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 MED9Q9NWA0 146 aa10.82□□□□□ -0.68
RNF4-213ENST00000509388 CRXO43186 299 aaPredicted RBP10.81□□□□□ -0.68
RNF4-213ENST00000509388 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
RNF4-213ENST00000509388 ZNF506Q5JVG8 444 aa10.81□□□□□ -0.68
RNF4-213ENST00000509388 GFI1BQ5VTD9 330 aa10.81□□□□□ -0.68
RNF4-213ENST00000509388 CSNK1G2-AS1Q8NCQ2 148 aa10.81□□□□□ -0.68
RNF4-213ENST00000509388 OR11H2Q8NH07 326 aa10.81□□□□□ -0.68
RNF4-213ENST00000509388 OVOL2Q9BRP0 275 aa10.81□□□□□ -0.68
RNF4-213ENST00000509388 AGRNO00468 2067 aa10.81□□□□□ -0.68
RNF4-213ENST00000509388 TRAV12-3A0A0B4J271 114 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 C7orf71A4D174 169 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 KLLNB2CW77 178 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 IGLV2-11P01706 119 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 KIR3DS1Q14943 382 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 CLLU1Q5K131 121 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 TMEM256Q8N2U0 113 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 C20orf144Q9BQM9 153 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 ZFP30Q9Y2G7 519 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 KLF12Q9Y4X4 402 aa10.8□□□□□ -0.68
RNF4-213ENST00000509388 H7BYZ3 331 aa10.79□□□□□ -0.68
RNF4-213ENST00000509388 HTN1P15515 57 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms