RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 SAMD10Q9BYL1 202 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 NPFFR1Q9GZQ6 430 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 GSN-AS1Q9NRJ2 163 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 PDZD2O15018 2839 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 WFDC3Q8IUB2 231 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 USMG5Q96IX5 58 aa11.38□□□□□ -0.59
PHF3-209ENST00000509330 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.37□□□□□ -0.59
PHF3-209ENST00000509330 CYB5R2Q6BCY4 276 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 FAM19A2Q8N3H0 131 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 NPIPB6E9PJ23 425 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 S100A7P31151 101 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 CFHR3Q02985 330 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 Q6YL49 198 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 SIGLECL1Q8N7X8 197 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 C20orf173Q96LM9 149 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 PRO1933Q9H354 126 aa11.37□□□□□ -0.59
PHF3-209ENST00000509330 SORL1Q92673 2214 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 F6UB75 175 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 NDUFA4O00483 81 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 ORM1P02763 201 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 NTF3P20783 257 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 TFPI2P48307 235 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 GLMPQ8WWB7 406 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 A0A0G2JLM5 398 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 A0A1B0GXF2 115 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 TMEM189A5PLL7 270 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 FAM162BQ5T6X4 162 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 C16orf54Q6UWD8 224 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 LRRC75A-AS1Q8N1F1 130 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 RHPN1-AS1Q9BWJ2 59 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
PHF3-209ENST00000509330 PSMB8P28062 276 aa11.35□□□□□ -0.59
PHF3-209ENST00000509330 PSMG3-AS1Q96PY0 264 aa11.35□□□□□ -0.59
PHF3-209ENST00000509330 PEF1Q9UBV8 284 aaKnown RBP11.35□□□□□ -0.59
PHF3-209ENST00000509330 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
PHF3-209ENST00000509330 DEFB136Q30KP8 78 aa11.35□□□□□ -0.59
PHF3-209ENST00000509330 CT83Q5H943 113 aa11.35□□□□□ -0.59
PHF3-209ENST00000509330 WFDC12Q8WWY7 111 aa11.35□□□□□ -0.59
PHF3-209ENST00000509330 U3KQE9 123 aa11.35□□□□□ -0.59
PHF3-209ENST00000509330 A0A087X0K7 114 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 FSHBP01225 129 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 KHDC1LQ5JSQ8 128 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 C18orf65Q6ZTR6 163 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 SLC50A1Q9BRV3 221 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 TMEM213A2RRL7 107 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 LINC00587B1AMM8 73 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 H3BUA1 57 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 C1orf194Q5T5A4 169 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 LYZL1Q6UWQ5 148 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 C18orf32Q8TCD1 76 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 TMEM190Q8WZ59 177 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 ZNF702PQ9H963 129 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 RNF114Q9Y508 228 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 AKAP9Q99996 3911 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 TRBV6-1A0A0K0K1D8 114 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 SERTM2A0A1B0GWG4 89 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 AMTP48728 403 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 OR4B1Q8NGF8 309 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 NDFIP1Q9BT67 221 aa11.34□□□□□ -0.59
PHF3-209ENST00000509330 PMCHL1Q16048 86 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
PHF3-209ENST00000509330 C11orf44Q8N8P7 122 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 WIPF2Q8TF74 440 aaPredicted RBP11.33□□□□□ -0.6
PHF3-209ENST00000509330 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
PHF3-209ENST00000509330 WNK1Q9H4A3 2382 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 CSN3P07498 182 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 ZNF138P52744 262 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 Q6ZWC4 215 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 CLEC5AQ9NY25 188 aa11.33□□□□□ -0.6
PHF3-209ENST00000509330 FOXE3Q13461 319 aa11.32□□□□□ -0.6
PHF3-209ENST00000509330 COX19Q49B96 90 aa11.32□□□□□ -0.6
PHF3-209ENST00000509330 ATP5L2Q7Z4Y8 100 aa11.32□□□□□ -0.6
PHF3-209ENST00000509330 DAZ1Q9NQZ3 744 aaKnown RBP11.32□□□□□ -0.6
PHF3-209ENST00000509330 A8MWP6 167 aa11.32□□□□□ -0.6
PHF3-209ENST00000509330 SYNJ2BPP57105 145 aa11.32□□□□□ -0.6
PHF3-209ENST00000509330 Q0VG73 95 aa11.32□□□□□ -0.6
PHF3-209ENST00000509330 JOSD1Q15040 202 aaPredicted RBP11.32□□□□□ -0.6
PHF3-209ENST00000509330 ALKBH7Q9BT30 221 aaPredicted RBP11.32□□□□□ -0.6
PHF3-209ENST00000509330 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
PHF3-209ENST00000509330 A0A1W2PS18 150 aa11.31□□□□□ -0.6
PHF3-209ENST00000509330 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
PHF3-209ENST00000509330 IGHV7-4-1A0A0J9YVY3 117 aa11.31□□□□□ -0.6
PHF3-209ENST00000509330 SPRY2O43597 315 aa11.31□□□□□ -0.6
PHF3-209ENST00000509330 NAGKQ9UJ70 344 aa11.31□□□□□ -0.6
PHF3-209ENST00000509330 KRTDAPP60985 99 aa11.31□□□□□ -0.6
PHF3-209ENST00000509330 IGHV4OR15-8A0A075B7B6 117 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 A0A087WW49 117 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
PHF3-209ENST00000509330 KIR3DS1Q14943 382 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 KCNS1Q96KK3 526 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 MSRB1Q9NZV6 116 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms