RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 TRAV1-1A0A0B4J248 108 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 IGHV1-24A0A0C4DH33 117 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 SPRR5A0A1B0GTR4 108 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 A0A1B0GVG6 124 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 TCRBV4S1A1TA0A5B7 111 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 C9orf170A2RU37 121 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 E7EQL1 145 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 M0R2P5 195 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 SNAPC5O75971 98 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 DEFA4P12838 97 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 CCL4P13236 92 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 LINC00315P59091 139 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 TPPP2P59282 170 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 DIAPH2-AS1Q14236 149 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 IGFL1Q6UW32 110 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 CASC2Q6XLA1 102 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 ATP11AUNQ6ZP68 121 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 PLPP5Q8NEB5 264 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 ATP6V0E2Q8NHE4 81 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 TAS2R8Q9NYW2 309 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 PRO2289Q9P1D8 64 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 CCL26Q9Y258 94 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 DNAJC15Q9Y5T4 150 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 GREB1Q4ZG55 1949 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 ZNF407Q9C0G0 2248 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 ARHGAP31Q2M1Z3 1444 aa1.32□□□□□ -2.2
DEPDC1B-204ENST00000509006 N4BP2Q86UW6 1770 aaPredicted RBP1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 COL1A1P02452 1464 aaPredicted RBP1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 PRR14LQ5THK1 2151 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 CDK5RAP2Q96SN8 1893 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 TRAV14DV4A0A0A6YYC5 116 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 TRAV10A0A0B4J240 114 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 TRAV3A0A0B4J244 114 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 C3orf85A0A1B0GTC6 90 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 FAM236AA0A1B0GUQ0 79 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 FAM236BA0A1B0GV22 79 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 J3QLW9 94 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 TNFP01375 233 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 IFNA17P01571 189 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 CD2P06729 351 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 CXCL8P10145 99 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 PIPP12273 146 aaPredicted RBP1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 BRS3P32247 399 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 SSR2P43308 183 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 ROMO1P60602 79 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 LINC00311Q8N616 119 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 OR10AG1Q8NH19 301 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 OTOSQ8NHW6 89 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 C20orf166-AS1Q96NR2 134 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 SCN3BQ9NY72 215 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 ZFP30Q9Y2G7 519 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 IER3IP1Q9Y5U9 82 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 LHFPL6Q9Y693 200 aa1.31□□□□□ -2.2
DEPDC1B-204ENST00000509006 MAPKBP1O60336 1514 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 SLIT2O94813 1529 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 SMARCA4P51532 1647 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 IGKV2D-26A0A0A0MRZ7 120 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 TMEM218A2RU14 115 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 IBA57-AS1B1ANH7 110 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 APOC4-APOC2K7ER74 178 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 EDF1O60869 148 aaKnown RBP1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 ZNF737O75373 536 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 APOC2P02655 101 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 MOBPQ13875 183 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 Q56UQ5 140 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 C1orf134Q5TEV5 83 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 C12orf73Q69YU5 71 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 C3orf62Q6ZUJ4 267 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 Q6ZUT4 128 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 Q8IYB0 196 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 LYPD1Q8N2G4 141 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 SVBPQ8N300 66 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 Q8N814 137 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 VSTM2AQ8TAG5 236 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 DPH3Q96FX2 82 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 ZC2HC1AQ96GY0 325 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 C14orf144Q96I85 54 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 SDF2Q99470 211 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 NABP2Q9BQ15 211 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 NIT2Q9NQR4 276 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 FKBP11Q9NYL4 201 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 BOKQ9UMX3 212 aaPredicted RBP1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 NOP16Q9Y3C1 178 aaKnown RBP1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 ANAPC1Q9H1A4 1944 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 RTEL1-TNFRSF6BF6WH68 1400 aa1.3□□□□□ -2.2
DEPDC1B-204ENST00000509006 CCDC179H3BU77 68 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 PLXNB1O43157 2135 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 SNCGO76070 127 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 CD3DP04234 171 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 CD14P08571 375 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 PDE6HQ13956 83 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 KRTAP13-2Q52LG2 175 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 SPANXN1Q5VSR9 72 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 OR2T2Q6IF00 324 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 TEX261Q6UWH6 196 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 GKN2Q86XP6 184 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 SNX29P2Q8IUI4 249 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 SPTSSAQ969W0 71 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 RPRMQ9NS64 109 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 COA4Q9NYJ1 87 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms