RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ZNF493Q6ZR52 646 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 CCDC28AQ8IWP9 274 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 MRPL53Q96EL3 112 aaKnown RBP10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 C20orf144Q9BQM9 153 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 PAXXQ9BUH6 204 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 OR51M1Q9H341 326 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 FUT9Q9Y231 359 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 ALG5Q9Y673 324 aa10.43□□□□□ -0.74
UBE2D3-228ENST00000508974 HECTD4Q9Y4D8 3996 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 BTN1A1Q13410 526 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 PDE6HQ13956 83 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 PHYHIPLQ96FC7 376 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 ODF3Q96PU9 254 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 MRPL32Q9BYC8 188 aaKnown RBP10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 AGPAT4-IT1Q9H0P7 198 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 PRELID1Q9Y255 219 aa10.42□□□□□ -0.74
UBE2D3-228ENST00000508974 GAGE12BA1L429 117 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 C7orf71A4D174 169 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 CBY3A6NI87 242 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 SNURFLB1AK76 121 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 GAGE7O76087 117 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 IFNA5P01569 189 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 GAGE12FP0CL80 117 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 GAGE12GP0CL81 117 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 GAGE12IP0CL82 117 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 RNASE4P34096 147 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 CD300CQ08708 224 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 C15orf53Q8NAA6 179 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 SCGB1C1Q8TD33 95 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 RNF141Q8WVD5 230 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 FXYD5Q96DB9 178 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 VGLL1Q99990 258 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 ATG101Q9BSB4 218 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 DNAH2Q9P225 4427 aa10.41□□□□□ -0.74
UBE2D3-228ENST00000508974 SLC25A5P05141 298 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-228ENST00000508974 UBE2L3P68036 154 aaKnown RBP10.4□□□□□ -0.74
UBE2D3-228ENST00000508974 OR5I1Q13606 314 aa10.4□□□□□ -0.74
UBE2D3-228ENST00000508974 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
UBE2D3-228ENST00000508974 Q8TAT8 98 aa10.4□□□□□ -0.74
UBE2D3-228ENST00000508974 WFDC1Q9HC57 220 aa10.4□□□□□ -0.74
UBE2D3-228ENST00000508974 GPX1P07203 203 aa10.39□□□□□ -0.75
UBE2D3-228ENST00000508974 RANP62826 216 aaKnown RBP10.39□□□□□ -0.75
UBE2D3-228ENST00000508974 RNF212Q495C1 297 aa10.39□□□□□ -0.75
UBE2D3-228ENST00000508974 PRR9Q5T870 116 aa10.39□□□□□ -0.75
UBE2D3-228ENST00000508974 ZNF503Q96F45 646 aa10.39□□□□□ -0.75
UBE2D3-228ENST00000508974 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
UBE2D3-228ENST00000508974 PYGO2Q9BRQ0 406 aa10.39□□□□□ -0.75
UBE2D3-228ENST00000508974 A0A0J9YY99 117 aa10.38□□□□□ -0.75
UBE2D3-228ENST00000508974 Q6ZQT7 251 aa10.38□□□□□ -0.75
UBE2D3-228ENST00000508974 C9orf47Q6ZRZ4 202 aa10.38□□□□□ -0.75
UBE2D3-228ENST00000508974 FAM19A4Q96LR4 140 aa10.38□□□□□ -0.75
UBE2D3-228ENST00000508974 GSN-AS1Q9NRJ2 163 aa10.38□□□□□ -0.75
UBE2D3-228ENST00000508974 KLLNB2CW77 178 aa10.37□□□□□ -0.75
UBE2D3-228ENST00000508974 RTL8CO15255 209 aa10.37□□□□□ -0.75
UBE2D3-228ENST00000508974 KHDC3LQ587J8 217 aa10.37□□□□□ -0.75
UBE2D3-228ENST00000508974 Q6ZTI0 123 aa10.37□□□□□ -0.75
UBE2D3-228ENST00000508974 Q9H3A6 140 aa10.37□□□□□ -0.75
UBE2D3-228ENST00000508974 RPH3ALQ9UNE2 315 aa10.37□□□□□ -0.75
UBE2D3-228ENST00000508974 FAT2Q9NYQ8 4349 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 TRAV26-1A0A087WT03 109 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 PRSS29PA6NIE9 313 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 HMGB3O15347 200 aaKnown RBP10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 ZNF324O75467 553 aaPredicted RBP10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 PTTG1O95997 202 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 HOXA5P20719 270 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 CSN1S1P47710 185 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 RAB2AP61019 212 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 LGALS9BQ3B8N2 356 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 LINC00336Q6ZUF6 198 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 HYLS1Q96M11 299 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 MED28Q9H204 178 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 ZNF492Q9P255 531 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 TP53TG3Q9ULZ0 132 aa10.36□□□□□ -0.75
UBE2D3-228ENST00000508974 RGS13O14921 159 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 CRISP2P16562 243 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 ZNF138P52744 262 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 TAS2R45P59539 299 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 EIF4E3Q8N5X7 224 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 ZFAND2AQ8N6M9 145 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 LINC00612Q8N6U2 182 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 C11orf72Q8NBR9 251 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 GNPNAT1Q96EK6 184 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
UBE2D3-228ENST00000508974 TRGV2A0A075B6R0 118 aa10.34□□□□□ -0.75
UBE2D3-228ENST00000508974 TRGV1A0A0A0MS02 117 aa10.34□□□□□ -0.75
UBE2D3-228ENST00000508974 A0A1W2PPV4 95 aa10.34□□□□□ -0.75
UBE2D3-228ENST00000508974 ACOT6Q3I5F7 207 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-228ENST00000508974 Q6ZR54 194 aa10.34□□□□□ -0.75
UBE2D3-228ENST00000508974 HSD17B11Q8NBQ5 300 aa10.34□□□□□ -0.75
UBE2D3-228ENST00000508974 ZNF680Q8NEM1 530 aa10.34□□□□□ -0.75
UBE2D3-228ENST00000508974 M6PRP20645 277 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 CCL18P55774 89 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 DAZ2Q13117 558 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 MUC21Q5SSG8 566 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 OR10G4Q8NGN3 311 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 OR10G9Q8NGN4 311 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 OR10G7Q8NGN6 311 aa10.33□□□□□ -0.76
UBE2D3-228ENST00000508974 ARPC5LQ9BPX5 153 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms