RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 KLK5Q9Y337 293 aaPredicted RBP7.62□□□□□ -1.19
POLR2J3-213ENST00000508848 CTXND1A0A1B0GTU2 59 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 A0A1W2PRE2 83 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 CXorf65A6NEN9 183 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 H3BTX0 84 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 M0R2Z0 102 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 C1QBP02746 253 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 SNRPCP09234 159 aaKnown RBP7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 SPART-AS1P0CW21 52 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 LGALSLQ3ZCW2 172 aaPredicted RBP7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 TMEM78Q5T7P6 136 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 FAM122CQ6P4D5 195 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 DPPA3Q6W0C5 159 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 PHYHIPLQ96FC7 376 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 PYGO2Q9BRQ0 406 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 SH3BGRL3Q9H299 93 aa7.61□□□□□ -1.19
POLR2J3-213ENST00000508848 KANTRA0A1W2PQU2 76 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 PGPA6NDG6 321 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 LYRM9A8MSI8 78 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 DIRC3C9JPN6 131 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 BCL2L11O43521 198 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 ZNF324O75467 553 aaPredicted RBP7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 ARL14EPLP0DKL9 152 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 GCHFRP30047 84 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 ZNF138P52744 262 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 FXYD7P58549 80 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 AKR1C8PQ5T2L2 129 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 EIF5AL1Q6IS14 154 aaKnown RBP7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 BAP18Q8IXM2 172 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 STOML3Q8TAV4 291 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 PHLDA1Q8WV24 401 aaPredicted RBP7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 FAM210BQ96KR6 192 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 TMEM208Q9BTX3 173 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 DKK2Q9UBU2 259 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 ARL2-SNX15V9GYD0 113 aa7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 KMT2CQ8NEZ4 4911 aaKnown RBP7.6□□□□□ -1.19
POLR2J3-213ENST00000508848 LOC102723971A0A1B0GUV8 181 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 FHITP49789 147 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 TMUB2Q71RG4 321 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 ZFAND2AQ8N6M9 145 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 C5orf17Q8NAS9 161 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 CMTM2Q8TAZ6 248 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 MBD3L1Q8WWY6 194 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 TCEAL7Q9BRU2 100 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 TP53TG3Q9ULZ0 132 aa7.59□□□□□ -1.19
POLR2J3-213ENST00000508848 STARD9Q9P2P6 4700 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 TRAV10A0A0B4J240 114 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 C7orf71A4D174 169 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 SMLR1H3BR10 107 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 TPT1P13693 172 aaKnown RBP7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 RAB5CP51148 216 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 ZNF726P1Q15940 193 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 C12orf74Q32Q52 190 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 ANXA2RQ3ZCQ2 193 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 GFI1BQ5VTD9 330 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 TMEM263Q8WUH6 116 aaKnown RBP7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 C16orf74Q96GX8 76 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 LINC01587Q99440 93 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 VGLL1Q99990 258 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 NIPSNAP3BQ9BS92 247 aa7.58□□□□□ -1.2
POLR2J3-213ENST00000508848 TRAV12-2A0A075B6T6 113 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 TRAV1-1A0A0B4J248 108 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 LCE6AA0A183 80 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 PLAC8L1A1L4L8 177 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 K7EQM0 130 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 DEFB4AO15263 64 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 NANOS2P60321 138 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 DAZ2Q13117 558 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 ERCC8Q13216 396 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 PMS2P11Q13670 270 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 ZFAND6Q6FIF0 208 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 AKAP14Q86UN6 197 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 CCDC28AQ8IWP9 274 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 RNASE8Q8TDE3 154 aaKnown RBP7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 C2CD4CQ8TF44 421 aa7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 TIMM8BQ9Y5J9 83 aaPredicted RBP7.57□□□□□ -1.2
POLR2J3-213ENST00000508848 IGHV3OR16-12A0A075B7B8 117 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 GPX1P07203 203 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 SUMO1P63165 101 aaKnown RBP7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 TDRG1Q3Y452 100 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 Q6AWC8 147 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 LINC00612Q8N6U2 182 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 C18orf15Q96N68 181 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 ZNF471Q9BX82 626 aaPredicted RBP7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 EPDR1Q9UM22 224 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 YTHDF2Q9Y5A9 579 aaKnown RBP7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 LYSTQ99698 3801 aa7.56□□□□□ -1.2
POLR2J3-213ENST00000508848 IGKV2-40A0A087WW87 121 aaPredicted RBP7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 CBY3A6NI87 242 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 ZNF705GA8MUZ8 300 aaPredicted RBP7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 HMGB3O15347 200 aaKnown RBP7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 PFDN1O60925 122 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 IGKV2D-40P01614 121 aaPredicted RBP7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 TCRAP04437 139 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 AZU1P20160 251 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 PPT1P50897 306 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 KIR3DS1Q14943 382 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 SAPCD1Q5SSQ6 148 aa7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 IBA57Q5T440 356 aaKnown RBP7.55□□□□□ -1.2
POLR2J3-213ENST00000508848 FAM222AQ5U5X8 452 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms