RNA–Protein interactions for RNA: ENST00000508808.1

TRIM23-206, Transcript of tripartite motif containing 23, humanhuman

TSL 5

Gene TRIM23, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-206ENST00000508808 IGKV1D-42A0A075B6H8 117 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TRBV10-2A0A0K0K1G8 114 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 MEIS3P1A6NDR6 274 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 OR51F1A6NGY5 319 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 FAM159BA6NKW6 160 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TMEM212A6NML5 194 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 C1orf196B1AJZ1 125 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 H3BQF6 201 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 H3BQV1 296 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 PIRO00625 290 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 OR2J2O76002 312 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ZNF682O95780 498 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 DHFRP00374 187 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 PMP2P02689 132 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 C1QAP02745 245 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CLPSP04118 112 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 HMGN1P05114 100 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SERPINE1P05121 402 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 MSMBP08118 114 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SMIM10L2AP0DMW4 78 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SMIM10L2BP0DMW5 78 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 IDO1P14902 403 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SPI1P17947 270 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SRIP30626 198 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 AKR1C3P42330 323 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CDC42P60953 191 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 MRPS25P82663 173 aaKnown RBP0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ZNF345Q14585 488 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SPA17Q15506 151 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 NDUFA5Q16718 116 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ARHGAP11BQ3KRB8 267 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 FKBP1CQ5VVH2 108 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TMEM42Q69YG0 159 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 C3orf33Q6P1S2 294 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 LCN15Q6UWW0 184 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 Q6ZQT0 140 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 DHFR2Q86XF0 187 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SNX29P2Q8IUI4 249 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 C4orf33Q8N1A6 199 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 DYNAPQ8N1N2 210 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 OR8B3Q8NGG8 313 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 OR52L1Q8NGH7 329 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 OR5A1Q8NGJ0 315 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 OR13C4Q8NGS5 318 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TERB2Q8NHR7 220 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 WFDC5Q8TCV5 224 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 NEK7Q8TDX7 302 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CT55Q8WUE5 264 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 FAM172AQ8WUF8 416 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TMEM106AQ96A25 262 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 BORCS7Q96B45 105 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 RMND5BQ96G75 393 aaPredicted RBP0.72□□□□□ -2.29
TRIM23-206ENST00000508808 PHB2Q99623 299 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CMSS1Q9BQ75 279 aaKnown RBP0.72□□□□□ -2.29
TRIM23-206ENST00000508808 VPS25Q9BRG1 176 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 GINS4Q9BRT9 223 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CCDC90BQ9GZT6 254 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TLNRD1Q9H1K6 362 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TRABDQ9H4I3 376 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ENY2Q9NPA8 101 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 GSKIPQ9P0R6 139 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 SS18L2Q9UHA2 77 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ERGIC3Q9Y282 383 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 V9GYQ6 96 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 CHD3Q12873 2000 aaKnown RBP0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ZANQ9Y493 2812 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 FAT4Q6V0I7 4981 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 TLN1Q9Y490 2541 aaKnown RBP0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ITPR1Q14643 2758 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 ZFC3H1O60293 1989 aaKnown RBP0.72□□□□□ -2.29
TRIM23-206ENST00000508808 MCM3APO60318 1980 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 DMXL2Q8TDJ6 3036 aa0.72□□□□□ -2.29
TRIM23-206ENST00000508808 DIDO1Q9BTC0 2240 aaKnown RBP0.72□□□□□ -2.29
TRIM23-206ENST00000508808 LAMA4Q16363 1823 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 SPTAN1Q13813 2472 aaKnown RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 CCDC168Q8NDH2 2452 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 TENM3Q9P273 2699 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 IRGMA1A4Y4 181 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 TLCD2A6NGC4 264 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 TMEM238C9JI98 176 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 C19orf84I3L1E1 186 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 OR7C1O76099 320 aaPredicted RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 APOC1P02654 83 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 CRPP02741 224 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 CST2P09228 141 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 ZNF25P17030 456 aaPredicted RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 GPX2P18283 190 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 FKBP2P26885 142 aaKnown RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 EMP1P54849 157 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 GNG2P59768 71 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 RAB4BP61018 213 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 COPZ1P61923 177 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 HIST1H4AP62805 103 aaKnown RBP0.71□□□□□ -2.3
TRIM23-206ENST00000508808 HIST1H3AP68431 136 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 S100A12P80511 92 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 H3F3AP84243 136 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 PLCXD2Q0VAA5 305 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 ALX1Q15699 326 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 Q1T7F1 81 aa0.71□□□□□ -2.3
TRIM23-206ENST00000508808 SPANXN3Q5MJ09 141 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms