RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RAB2AP61019 212 aa11.46□□□□□ -0.57
LMNA-222ENST00000508500 HIST1H1AQ02539 215 aaPredicted RBP11.46□□□□□ -0.57
LMNA-222ENST00000508500 PXDC1Q5TGL8 231 aa11.46□□□□□ -0.57
LMNA-222ENST00000508500 TMEM208Q9BTX3 173 aa11.46□□□□□ -0.57
LMNA-222ENST00000508500 ZNF331Q9NQX6 463 aaPredicted RBP11.46□□□□□ -0.57
LMNA-222ENST00000508500 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
LMNA-222ENST00000508500 M0R2N4 97 aa11.45□□□□□ -0.58
LMNA-222ENST00000508500 FFAR4Q5NUL3 377 aa11.45□□□□□ -0.58
LMNA-222ENST00000508500 Q6ZRG5 221 aa11.45□□□□□ -0.58
LMNA-222ENST00000508500 MBD3L1Q8WWY6 194 aa11.45□□□□□ -0.58
LMNA-222ENST00000508500 FAM210BQ96KR6 192 aa11.45□□□□□ -0.58
LMNA-222ENST00000508500 PXMP4Q9Y6I8 212 aa11.45□□□□□ -0.58
LMNA-222ENST00000508500 DNAH11Q96DT5 4516 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 PRAC2D3DTV9 90 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 H3BTX0 84 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 SLC17A3O00476 420 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 RTL8CO15255 209 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 B2MP61769 119 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 DAD1P61803 113 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 KIR3DS1Q14943 382 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 EIF4E3Q8N5X7 224 aaKnown RBP11.44□□□□□ -0.58
LMNA-222ENST00000508500 RPUSD4Q96CM3 377 aaKnown RBP11.44□□□□□ -0.58
LMNA-222ENST00000508500 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
LMNA-222ENST00000508500 SLC39A9Q9NUM3 307 aa11.44□□□□□ -0.58
LMNA-222ENST00000508500 MUC4Q99102 2169 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 TRAV5A0A0B4J249 113 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 CTXND1A0A1B0GTU2 59 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 RAB19A4D1S5 217 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 H3BQ15 152 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 H2AFB1P0C5Y9 115 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 IGLC2P0DOY2 106 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 TSPOP30536 169 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 RHOBP62745 196 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 MIC13Q5XKP0 118 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 OR10G4Q8NGN3 311 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 OR10G9Q8NGN4 311 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 OR10G7Q8NGN6 311 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 FAM213BQ8TBF2 198 aa11.43□□□□□ -0.58
LMNA-222ENST00000508500 LYRM9A8MSI8 78 aa11.42□□□□□ -0.58
LMNA-222ENST00000508500 COX7A2P2O60397 106 aa11.42□□□□□ -0.58
LMNA-222ENST00000508500 LCN15Q6UWW0 184 aa11.42□□□□□ -0.58
LMNA-222ENST00000508500 Q6ZR54 194 aa11.42□□□□□ -0.58
LMNA-222ENST00000508500 BPIFA4PQ86YQ2 179 aa11.42□□□□□ -0.58
LMNA-222ENST00000508500 OR1L4Q8NGR5 311 aa11.42□□□□□ -0.58
LMNA-222ENST00000508500 PFDN5Q99471 154 aa11.42□□□□□ -0.58
LMNA-222ENST00000508500 IGLV2-18A0A075B6J9 118 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 A0A1W2PPV4 95 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 LGALS9BQ3B8N2 356 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 C10orf113Q5VZT2 155 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 UQCC3Q6UW78 93 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 S100A7AQ86SG5 101 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 LINC01587Q99440 93 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 SLC50A1Q9BRV3 221 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 MRPL32Q9BYC8 188 aaKnown RBP11.41□□□□□ -0.58
LMNA-222ENST00000508500 SMDT1Q9H4I9 107 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 DNAJC4Q9NNZ3 241 aa11.41□□□□□ -0.58
LMNA-222ENST00000508500 DEFB130BP0DP73 79 aa11.4□□□□□ -0.58
LMNA-222ENST00000508500 DEFB130AP0DP74 79 aa11.4□□□□□ -0.58
LMNA-222ENST00000508500 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.58
LMNA-222ENST00000508500 CDKN1BP46527 198 aa11.4□□□□□ -0.58
LMNA-222ENST00000508500 COMMD7Q86VX2 200 aa11.4□□□□□ -0.58
LMNA-222ENST00000508500 RNF24Q9Y225 148 aa11.4□□□□□ -0.58
LMNA-222ENST00000508500 NDUFS6O75380 124 aaKnown RBP11.39□□□□□ -0.59
LMNA-222ENST00000508500 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
LMNA-222ENST00000508500 PPT1P50897 306 aa11.39□□□□□ -0.59
LMNA-222ENST00000508500 TAS2R60P59551 318 aa11.39□□□□□ -0.59
LMNA-222ENST00000508500 RNF212Q495C1 297 aa11.39□□□□□ -0.59
LMNA-222ENST00000508500 UBE2DNLQ8IWF7 75 aa11.39□□□□□ -0.59
LMNA-222ENST00000508500 TMEM256Q8N2U0 113 aa11.39□□□□□ -0.59
LMNA-222ENST00000508500 ZNF586Q9NXT0 402 aa11.39□□□□□ -0.59
LMNA-222ENST00000508500 HTN1P15515 57 aa11.38□□□□□ -0.59
LMNA-222ENST00000508500 S100A1P23297 94 aa11.38□□□□□ -0.59
LMNA-222ENST00000508500 FHITP49789 147 aa11.38□□□□□ -0.59
LMNA-222ENST00000508500 RNASE8Q8TDE3 154 aaKnown RBP11.38□□□□□ -0.59
LMNA-222ENST00000508500 SFT2D1Q8WV19 159 aa11.38□□□□□ -0.59
LMNA-222ENST00000508500 PCNPQ8WW12 178 aaKnown RBP11.38□□□□□ -0.59
LMNA-222ENST00000508500 RAB24Q969Q5 203 aa11.38□□□□□ -0.59
LMNA-222ENST00000508500 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
LMNA-222ENST00000508500 MAP1LC3B2A6NCE7 125 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 PRSS29PA6NIE9 313 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 CT45A10P0DMU9 189 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 TAS2R45P59539 299 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 GFI1BQ5VTD9 330 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 FAM122CQ6P4D5 195 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 SLC7A5P1Q8MH63 180 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 MAP1LC3BQ9GZQ8 125 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 FUT9Q9Y231 359 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 RYR1P21817 5038 aa11.37□□□□□ -0.59
LMNA-222ENST00000508500 F5H768 121 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 IFNA1P01562 189 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 STAG3L2P0CL84 134 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 STAG3L3P0CL85 134 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 ZNF726P1Q15940 193 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 C15orf53Q8NAA6 179 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 FAM210AQ96ND0 272 aa11.36□□□□□ -0.59
LMNA-222ENST00000508500 NOP10Q9NPE3 64 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms